RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 PPBPP02775 128 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 RLN2P04090 185 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 HLA-DPB1P04440 258 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 IFNA6P05013 189 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 ARG1P05089 322 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 CRHP06850 196 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 GUSBP08236 651 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 FGF4P08620 206 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 MRPL3P09001 348 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 OR8G3PP0DMU2 310 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 SMIM10L1P0DMW3 83 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 CD37P11049 281 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 SCGB1A1P11684 91 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 MYL12AP19105 171 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 CSNK2A2P19784 350 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 CELP19835 753 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 TCN2P20062 427 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 RAB3BP20337 219 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 MSR1P21757 451 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 MYL9P24844 172 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 NPY1RP25929 384 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 IVDP26440 423 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 SDC4P31431 198 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 S100A11P31949 105 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 FOXN2P32314 431 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 GGT2P36268 569 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 GPX4P36969 197 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 COILP38432 576 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 OR1G1P47890 313 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 GCLMP48507 274 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 INPP1P49441 399 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 CDKN2DP55273 166 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 RGS8P57771 180 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 TAS2R39P59534 338 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 AP3S2P59780 193 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 RPS20P60866 119 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 CDC42P60953 191 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 CXCR4P61073 352 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 STXBP1P61764 594 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 RRAS2P62070 204 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 SP4Q02446 784 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 CYP24A1Q07973 514 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 SYCNQ0VAF6 134 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 RBMY1FQ15415 496 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 HMGN3Q15651 99 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 ZNF726P1Q15940 193 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 GUK1Q16774 197 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 GOLGA7BQ2TAP0 167 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 FAM78AQ5JUQ0 283 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 TPRG1LQ5T0D9 272 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 C9orf64Q5T6V5 341 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 C1orf185Q5T7R7 199 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 STEAP4Q687X5 459 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 ULK3Q6PHR2 472 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 TEX43Q6ZNM6 134 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 Q6ZR03 302 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 CMC1Q7Z7K0 106 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 BIVMQ86UB2 503 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 LRP11Q86VZ4 500 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 FUNDC1Q8IVP5 155 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 PDZD9Q8IXQ8 264 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 DEFB107AQ8IZN7 70 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 ARRDC1Q8N5I2 433 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 ACBD4Q8NC06 268 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 FBXO36Q8NEA4 188 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 BPIFB6Q8NFQ5 453 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 OR10AD1Q8NGE0 317 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 OR4C6Q8NH72 309 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 OR10A6Q8NH74 314 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 LYPD6BQ8NI32 183 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 DYNC2LI1Q8TCX1 351 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 NEK7Q8TDX7 302 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 ZNF431Q8TF32 576 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 GLYATL2Q8WU03 294 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 TSEN15Q8WW01 171 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 APH1BQ8WW43 257 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 AP3S1Q92572 193 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 HGDQ93099 445 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 ISG20Q96AZ6 181 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 RCN3Q96D15 328 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 SMARCD1Q96GM5 515 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 CENPNQ96H22 339 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 SMIM10Q96HG1 83 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 RNF170Q96K19 258 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 COL21A1Q96P44 957 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 OR2A5Q96R48 311 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 ZNF382Q96SR6 550 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 S100A13Q99584 98 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 TEAD3Q99594 435 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 PHB2Q99623 299 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 RBBP8Q99708 897 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 C7orf50Q9BRJ6 194 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 CHAC1Q9BUX1 264 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 DDA1Q9BW61 102 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 NKX6-2Q9C056 277 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 COA1Q9GZY4 146 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 DHX35Q9H5Z1 703 aaKnown RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 ZNF430Q9H8G1 570 aaPredicted RBP1.56□□□□□ -2.16
CBX3-208ENST00000497498 RNF122Q9H9V4 155 aa1.56□□□□□ -2.16
CBX3-208ENST00000497498 NMNAT1Q9HAN9 279 aaPredicted RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms