RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 GNG3P63215 75 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 ELF3P78545 371 aaPredicted RBP3.08□□□□□ -1.92
SNX13-211ENST00000496855 FABP5Q01469 135 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 ELOCQ15369 112 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 ZCWPW2Q504Y3 356 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 RNASE13Q5GAN3 156 aaKnown RBP3.08□□□□□ -1.92
SNX13-211ENST00000496855 FAM201AQ5SY85 155 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 N4BP2L1Q5TBK1 243 aaPredicted RBP3.08□□□□□ -1.92
SNX13-211ENST00000496855 Q6P435 159 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 IGFL3Q6UXB1 125 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 DEFB125Q8N687 156 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 SLC25A29Q8N8R3 303 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 OR9I1Q8NGQ6 314 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 KLK6Q92876 244 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 ACY3Q96HD9 319 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 SFRP2Q96HF1 295 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 CAMK2N2Q96S95 79 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 CDX2Q99626 313 aaPredicted RBP3.08□□□□□ -1.92
SNX13-211ENST00000496855 ANAPC13Q9BS18 74 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 NANOGQ9H9S0 305 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 BATF3Q9NR55 127 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 C14orf105Q9NVL8 296 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 TAS2R1Q9NYW7 299 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 ZNF225Q9UK10 706 aa3.08□□□□□ -1.92
SNX13-211ENST00000496855 FAM32AQ9Y421 112 aaKnown RBP3.08□□□□□ -1.92
SNX13-211ENST00000496855 GPATCH8Q9UKJ3 1502 aaKnown RBP3.07□□□□□ -1.92
SNX13-211ENST00000496855 PIK3C2GO75747 1445 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 NOS1P29475 1434 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 CPDO75976 1380 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 MTUS2Q5JR59 1369 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 DHX57Q6P158 1386 aaKnown RBP3.07□□□□□ -1.92
SNX13-211ENST00000496855 IGHV5-10-1A0A0J9YXX1 117 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 A0A1B0GV72 72 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 FAAHO00519 579 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 IGHV3-11P01762 117 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 TTRP02766 147 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 IGHV4-34P06331 123 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 GUSBP08236 651 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 OR13C7P0DN81 318 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 FGF6P10767 208 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 LHX2P50458 406 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 TIMM10P62072 90 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 HIST1H3AP68431 136 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 S100A12P80511 92 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 H3F3AP84243 136 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 NTM-AS1Q6ZSK4 140 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 HIST2H3AQ71DI3 136 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 DCAF4L2Q8NA75 395 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 OR4K5Q8NGD3 323 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 OR5K1Q8NHB7 308 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 SLC35E1Q96K37 410 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 YPEL4Q96NS1 127 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 THTPAQ9BU02 230 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 ENY2Q9NPA8 101 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 DOK5Q9P104 306 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 TBX21Q9UL17 535 aa3.07□□□□□ -1.92
SNX13-211ENST00000496855 GRIN2BQ13224 1484 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 ZBED9Q6R2W3 1325 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 TMED7-TICAM2A0A0A6YYA0 188 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 PQLC2LA1A4F0 135 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 CD300LBA8K4G0 201 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 SLC37A4O43826 429 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 IFNA21P01568 189 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 IGLV3-25P01717 112 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 IGHMP01871 453 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 FBP1P09467 338 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 CTSEP14091 401 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 CTLA4P16410 223 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 MPIP34949 423 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 HSPA9P38646 679 aaKnown RBP3.06□□□□□ -1.92
SNX13-211ENST00000496855 PSMB3P49720 205 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 BTN3A2P78410 334 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 ABCA11PQ4W5N1 156 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 MRPL2Q5T653 305 aaKnown RBP3.06□□□□□ -1.92
SNX13-211ENST00000496855 LPCAT3Q6P1A2 487 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 Q8N976 141 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 OR10K1Q8NGX5 313 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 APOBEC3DQ96AK3 386 aaPredicted RBP3.06□□□□□ -1.92
SNX13-211ENST00000496855 CEP170P1Q96L14 293 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 DERL3Q96Q80 235 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 OR2A5Q96R48 311 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 OR7D2Q96RA2 312 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 RPP21Q9H633 154 aaKnown RBP3.06□□□□□ -1.92
SNX13-211ENST00000496855 NMNAT1Q9HAN9 279 aaPredicted RBP3.06□□□□□ -1.92
SNX13-211ENST00000496855 TMEM216Q9P0N5 145 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 OPTCQ9UBM4 332 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 ZNF230Q9UIE0 474 aaPredicted RBP3.06□□□□□ -1.92
SNX13-211ENST00000496855 LINC00527Q9UJ94 153 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 COL4A4P53420 1690 aaPredicted RBP3.06□□□□□ -1.92
SNX13-211ENST00000496855 TNS2Q63HR2 1409 aa3.06□□□□□ -1.92
SNX13-211ENST00000496855 TOP2BQ02880 1626 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 IGLV1-50A0A075B6I6 118 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 IGHV3-64DA0A0J9YX35 117 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 GMNCA6NCL1 334 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 FSTL3O95633 263 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 IFNA1P01562 189 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 CRYBA1P05813 215 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 ZNF688P0C7X2 276 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 CD79AP11912 226 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 HIST1H1TP22492 207 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms