RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SHOXO15266 292 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 B3GALNT1O75752 331 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 CCL3L1P16619 93 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 PPP5CP53041 499 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 UNC119Q13432 240 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 LRRC75BQ2VPJ9 315 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 TCTEX1D1Q8N7M0 179 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 OR13A1Q8NGR1 328 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 SMIM4Q8WVI0 70 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 HSD17B10Q99714 261 aaKnown RBP7.13□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF2Q9BSG1 426 aaPredicted RBP7.13□□□□□ -1.27
U2AF1-212ENST00000496462 NPFFR1Q9GZQ6 430 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.13□□□□□ -1.27
U2AF1-212ENST00000496462 CELSR1Q9NYQ6 3014 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 TRBV6-6A0A0A6YYG2 114 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 NCBP2LA6PVI3 153 aaKnown RBP7.13□□□□□ -1.27
U2AF1-212ENST00000496462 GPR31O00270 319 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 YPEL1O60688 119 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 CNIH1O95406 144 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 PMP2P02689 132 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 NUP62P37198 522 aaPredicted RBP7.13□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF260Q3ZCT1 412 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 DHRS7BQ6IAN0 325 aaPredicted RBP7.13□□□□□ -1.27
U2AF1-212ENST00000496462 SLC38A6Q8IZM9 456 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 OR4C13Q8NGP0 309 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 OR2T10Q8NGZ9 312 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 COQ8AQ8NI60 647 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 C8orf46Q8TAG6 207 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 YPEL2Q96QA6 119 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 GON7Q9BXV9 100 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 OR2W1Q9Y3N9 320 aa7.13□□□□□ -1.27
U2AF1-212ENST00000496462 FAM157AC9JC47 383 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 C12orf77C9JDV5 145 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 PSPNO60542 156 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 VAMP1P23763 118 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 F2RL1P55085 397 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 TMEM267Q0VDI3 215 aaPredicted RBP7.12□□□□□ -1.27
U2AF1-212ENST00000496462 SMCO1Q147U7 214 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF695Q8IW36 515 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 OR8H1Q8NGG4 311 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 PLPPR1Q8TBJ4 325 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 PPIL3Q9H2H8 161 aaKnown RBP7.12□□□□□ -1.27
U2AF1-212ENST00000496462 SLC35D1Q9NTN3 355 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 IL36RNQ9UBH0 155 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 MTFP1Q9UDX5 166 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 SSX2Q16385 188 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 C4orf46Q504U0 113 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 DMBX1Q8NFW5 382 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 OR52I2Q8NH67 350 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 OR4S2Q8NH73 311 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 OR1L1Q8NH94 360 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 KCNK15Q9H427 330 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 TMEM160Q9NX00 188 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 HILPDAQ9Y5L2 63 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 IGHV3OR16-10A0A075B7F0 116 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 SELLP14151 372 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 OMGP23515 440 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 MECP2P51608 486 aaKnown RBP7.12□□□□□ -1.27
U2AF1-212ENST00000496462 EFNB2P52799 333 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 SLC35B1P78383 322 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 FAM120AOSQ5T036 256 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 C17orf107Q6ZR85 190 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 TMED4Q7Z7H5 227 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 NOXA1Q86UR1 476 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 UBALD1Q8TB05 177 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 OR2D2Q9H210 308 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 ABCA1O95477 2261 aa7.12□□□□□ -1.27
U2AF1-212ENST00000496462 MEX3AA1L020 520 aaKnown RBP7.11□□□□□ -1.27
U2AF1-212ENST00000496462 J3QR06 171 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 MELTFP08582 738 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 TMEM11P17152 192 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 PPP1CCP36873 323 aaKnown RBP7.11□□□□□ -1.27
U2AF1-212ENST00000496462 UXS1Q8NBZ7 420 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 MRPL30Q8TCC3 161 aaKnown RBP7.11□□□□□ -1.27
U2AF1-212ENST00000496462 MAFIPQ8WZ33 124 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 UPRTQ96BW1 309 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF486Q96H40 463 aaPredicted RBP7.11□□□□□ -1.27
U2AF1-212ENST00000496462 HRASLSQ9HDD0 168 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 CTSZQ9UBR2 303 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 PDZD2O15018 2839 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 IGHV2-26A0A0B4J1V2 119 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 A6NHS1 94 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 F8VVB4 439 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 F8VWA3 439 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 DHODHQ02127 395 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF66Q6ZN08 573 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 KCTD9Q7L273 389 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 FOXRED2Q8IWF2 684 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 BEND2Q8NDZ0 799 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 PHB2Q99623 299 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 ZC4H2Q9NQZ6 224 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 ZFP57Q9NU63 452 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 WASHC3Q9Y3C0 194 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 TRAV39A0A0B4J263 110 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 HSD17B6O14756 317 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 RCC1P18754 421 aaPredicted RBP7.11□□□□□ -1.27
U2AF1-212ENST00000496462 SSTR5P35346 364 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 DYRK1AQ13627 763 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 ZNF273Q14593 569 aa7.11□□□□□ -1.27
U2AF1-212ENST00000496462 SURF2Q15527 256 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms