RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	ZNF737	O75373	536 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	NXPH2	O95156	264 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LHX2	P50458	406 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	SLC38A11	Q08AI6	406 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	TIPARP	Q7Z3E1	657 aa	Known RBP	11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	RBKS	Q9H477	322 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	OPA3	Q9H6K4	179 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	TMEM9B	Q9NQ34	198 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	TREM2	Q9NZC2	230 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	GAB2	Q9UQC2	676 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CACNA1D	Q01668	2161 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	OR5H1	A6NKK0	313 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	PGA5	P0DJD9	388 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	COX5B	P10606	129 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	CLEC12B	Q2HXU8	276 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ZNF703	Q9H7S9	590 aa	Predicted RBP	11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	ESPL1	Q14674	2120 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	KRAS	P01116	189 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	IGKV1-39	P01597	117 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	IGKV1-5	P01602	117 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	IGKV1D-39	P04432	117 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	RPS16	P62249	146 aa	Known RBP	11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	NCR3LG1	Q68D85	454 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	MRGPRG	Q86SM5	289 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	OR13D1	Q8NGV5	346 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	GTF3A	Q92664	365 aa	Known RBP	11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	LSM10	Q969L4	123 aa	Known RBP	11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	PRDM6	Q9NQX0	595 aa		11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.4	□□□□□ -0.58
SUPT20H-222	ENST00000495071	NCKAP5	O14513	1909 aa		11.4	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ZNF729	A6NN14	1252 aa	Predicted RBP	11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SLC25A6	P12236	298 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CLDN18	P56856	261 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SERF2	P84101	59 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR1C1	Q15619	314 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ZNF726P1	Q15940	193 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TMEM41B	Q5BJD5	291 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PINX1	Q96BK5	328 aa	Known RBP	11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071		J3QT63	122 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PTBP3	O95758	552 aa	Known RBP	11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	NUFIP2	Q7Z417	695 aa	Known RBP	11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ZNF295-AS1	Q8N0V1	137 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR10G4	Q8NGN3	311 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SSX3	Q99909	188 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	RTL8A	Q9BWD3	113 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SLC25A22	Q9H936	323 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071		A0A1W2PR80	420 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SMCO3	A2RU48	225 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	LAMTOR5	O43504	91 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OPN1MW	P04001	364 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	GRP	P07492	148 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OPN1MW2	P0DN77	364 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OPN1MW3	P0DN78	364 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	LRRC75B	Q2VPJ9	315 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SSX7	Q7RTT5	188 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR5T1	Q8NG75	326 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR5B12	Q96R08	314 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PSMG3	Q9BT73	122 aa	Predicted RBP	11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SDF2L1	Q9HCN8	221 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	KCNIP1	Q9NZI2	227 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PRSS50	Q9UI38	385 aa		11.39	□□□□□ -0.59
SUPT20H-222	ENST00000495071	FRYL	O94915	3013 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR2H2	O95918	312 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	WNT5A	P41221	380 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	HIST3H2BB	Q8N257	126 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CA5BP1	Q8WTZ4	195 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TAF15	Q92804	592 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TTTY12	Q9BZ98	90 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	WDR61	Q9GZS3	305 aa	Known RBP	11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	GATC	O43716	136 aa	Known RBP	11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	MOB1B	Q7L9L4	216 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	FGFRL1	Q8N441	504 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ABHD5	Q8WTS1	349 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	LAMP3	Q9UQV4	416 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071		B4E171	279 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CDIPT	O14735	213 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	NEURL1	O76050	574 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	MT-CO3	P00414	261 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	RAC2	P15153	192 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TSPAN7	P41732	249 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PSMB3	P49720	205 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	WDR25	Q64LD2	544 aa	Predicted RBP	11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	MBD3L1	Q8WWY6	194 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	NANOS1	Q8WY41	292 aa	Known RBP	11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	RHOV	Q96L33	236 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PACRG	Q96M98	296 aa	Predicted RBP	11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PRO1933	Q9H354	126 aa		11.38	□□□□□ -0.59
SUPT20H-222	ENST00000495071	RNF212B	A8MTL3	300 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TGOLN2	O43493	480 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PDGFB	P01127	241 aa	Predicted RBP	11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	IL2RG	P31785	369 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	HAPLN4	Q86UW8	402 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	DRAM1	Q8N682	238 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TMEM251	Q8N6I4	163 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ZNF709	Q8N972	641 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	P2RX4	Q99571	388 aa		11.37	□□□□□ -0.59

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