RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 HNF4GQ14541 408 aa12.76□□□□□ -0.37
LIME1-209ENST00000494776 ARL6IP1Q15041 203 aa12.76□□□□□ -0.37
LIME1-209ENST00000494776 C11orf88Q6PI97 169 aa12.76□□□□□ -0.37
LIME1-209ENST00000494776 TGIF2LXQ8IUE1 241 aa12.76□□□□□ -0.37
LIME1-209ENST00000494776 OR2AK2Q8NG84 335 aa12.76□□□□□ -0.37
LIME1-209ENST00000494776 LGALS14Q8TCE9 139 aa12.76□□□□□ -0.37
LIME1-209ENST00000494776 RTN4IP1Q8WWV3 396 aaPredicted RBP12.76□□□□□ -0.37
LIME1-209ENST00000494776 PHF21AQ96BD5 680 aa12.76□□□□□ -0.37
LIME1-209ENST00000494776 ZNF702PQ9H963 129 aa12.76□□□□□ -0.37
LIME1-209ENST00000494776 SLC23A1Q9UHI7 598 aa12.76□□□□□ -0.37
LIME1-209ENST00000494776 KCNK7Q9Y2U2 307 aa12.76□□□□□ -0.37
LIME1-209ENST00000494776 IGHV3-72A0A0B4J1Y9 119 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 FAM90A9PA6NNJ1 464 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 SERPINE3A8MV23 424 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 TXNL1O43396 289 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 SCGNO76038 276 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 IGKV1D-33P01593 117 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 IGKV1-33P01594 117 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 SCTP09683 121 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 VSIG10L2P0DP72 767 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 ZBTB25P24278 435 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 CEACAM6P40199 344 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 BLCAPP62952 87 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 HABP2Q14520 560 aaPredicted RBP12.75□□□□□ -0.37
LIME1-209ENST00000494776 Q6ZPA2 131 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 CROCCP3Q8IVE0 287 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 CFHR4Q92496 578 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 ETV7Q9Y603 341 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 TENM1Q9UKZ4 2725 aa12.75□□□□□ -0.37
LIME1-209ENST00000494776 TRDCB7Z8K6 153 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 M0QZK8 103 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 MFNGO00587 321 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 TGFBR1P36897 503 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 SCAND1P57086 179 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 CDNFQ49AH0 187 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 ABCA11PQ4W5N1 156 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 C9orf152Q5JTZ5 239 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 LY6G6FQ5SQ64 297 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 ST6GALNAC6Q969X2 333 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 CITED1Q99966 193 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 FUNDC2Q9BWH2 189 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 RHBDL2Q9NX52 303 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 MOB4Q9Y3A3 225 aa12.74□□□□□ -0.37
LIME1-209ENST00000494776 LANCL1O43813 399 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 FCGR3AP08637 254 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 VDAC2P45880 294 aaPredicted RBP12.73□□□□□ -0.37
LIME1-209ENST00000494776 ZNF137PP52743 207 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 KRTAP10-3P60369 221 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 KIR2DS1Q14954 304 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 FBLN7Q53RD9 439 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 Q8N2B8 174 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 KLHDC1Q8N7A1 406 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 OR5H6Q8NGV6 325 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 OR2T10Q8NGZ9 312 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 OR1A1Q9P1Q5 309 aa12.73□□□□□ -0.37
LIME1-209ENST00000494776 ST8SIA5O15466 376 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 FABP7O15540 132 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 TMEM127O75204 238 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 SMIM18P0DKX4 95 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 CD1BP29016 333 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 RPS19P39019 145 aaKnown RBP12.72□□□□□ -0.37
LIME1-209ENST00000494776 SERPINB10P48595 397 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 Q6ZS46 218 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 OR4A4PQ8NGN8 299 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 OR13F1Q8NGS4 319 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 EDARADDQ8WWZ3 215 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 MAFIPQ8WZ33 124 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 S1PR3Q99500 378 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 MRPS26Q9BYN8 205 aaKnown RBP12.72□□□□□ -0.37
LIME1-209ENST00000494776 PIPOXQ9P0Z9 390 aa12.72□□□□□ -0.37
LIME1-209ENST00000494776 ZNF230Q9UIE0 474 aaPredicted RBP12.72□□□□□ -0.37
LIME1-209ENST00000494776 SH2D7A6NKC9 451 aaPredicted RBP12.71□□□□□ -0.37
LIME1-209ENST00000494776 NCBP2LA6PVI3 153 aaKnown RBP12.71□□□□□ -0.37
LIME1-209ENST00000494776 BET1O15155 118 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 GSTP1P09211 210 aaKnown RBP12.71□□□□□ -0.37
LIME1-209ENST00000494776 OR3A3P47888 321 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 GNG2P59768 71 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 VBP1P61758 197 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 HERPUD1Q15011 391 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 HACD4Q5VWC8 232 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 ODF3L1Q8IXM7 274 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 IZUMO1Q8IYV9 350 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 EAF1Q96JC9 268 aaPredicted RBP12.71□□□□□ -0.37
LIME1-209ENST00000494776 DIABLOQ9NR28 239 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 SERTAD4Q9NUC0 356 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 ELF5Q9UKW6 265 aaPredicted RBP12.71□□□□□ -0.37
LIME1-209ENST00000494776 SPATA2Q9UM82 520 aa12.71□□□□□ -0.37
LIME1-209ENST00000494776 SAA2-SAA4A0A096LPE2 208 aa12.7□□□□□ -0.38
LIME1-209ENST00000494776 TMEM235A6NFC5 223 aa12.7□□□□□ -0.38
LIME1-209ENST00000494776 ZNF736B4DX44 427 aaPredicted RBP12.7□□□□□ -0.38
LIME1-209ENST00000494776 M0QZ24 198 aa12.7□□□□□ -0.38
LIME1-209ENST00000494776 RAB29O14966 203 aa12.7□□□□□ -0.38
LIME1-209ENST00000494776 MOSP00540 346 aa12.7□□□□□ -0.38
LIME1-209ENST00000494776 GSTT2P0CG29 244 aa12.7□□□□□ -0.38
LIME1-209ENST00000494776 GSTT2BP0CG30 244 aa12.7□□□□□ -0.38
LIME1-209ENST00000494776 SAA2P0DJI9 122 aaPredicted RBP12.7□□□□□ -0.38
LIME1-209ENST00000494776 NCS1P62166 190 aa12.7□□□□□ -0.38
LIME1-209ENST00000494776 PITPNAQ00169 270 aa12.7□□□□□ -0.38
LIME1-209ENST00000494776 EBI3Q14213 229 aa12.7□□□□□ -0.38
LIME1-209ENST00000494776 TMEM95Q3KNT9 176 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms