RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 YPEL2Q96QA6 119 aa26.29■■□□□ 1.8
CBX4-203ENST00000494546 Q9H521 79 aa26.29■■□□□ 1.8
CBX4-203ENST00000494546 NDUFB11Q9NX14 153 aa26.29■■□□□ 1.8
CBX4-203ENST00000494546 AK3Q9UIJ7 227 aa26.29■■□□□ 1.8
CBX4-203ENST00000494546 LINC00527Q9UJ94 153 aa26.29■■□□□ 1.8
CBX4-203ENST00000494546 PF4V1P10720 104 aa26.28■■□□□ 1.8
CBX4-203ENST00000494546 VEGFCP49767 419 aa26.28■■□□□ 1.8
CBX4-203ENST00000494546 C2orf76Q3KRA6 126 aa26.28■■□□□ 1.8
CBX4-203ENST00000494546 HDHD3Q9BSH5 251 aaPredicted RBP26.28■■□□□ 1.8
CBX4-203ENST00000494546 ZNF880Q6PDB4 577 aa26.27■■□□□ 1.8
CBX4-203ENST00000494546 Q8N9W7 124 aa26.27■■□□□ 1.8
CBX4-203ENST00000494546 CHPT1Q8WUD6 406 aa26.27■■□□□ 1.8
CBX4-203ENST00000494546 RIMS4Q9H426 269 aaPredicted RBP26.27■■□□□ 1.8
CBX4-203ENST00000494546 STEAP1Q9UHE8 339 aa26.27■■□□□ 1.8
CBX4-203ENST00000494546 PDCD5O14737 125 aa26.26■■□□□ 1.79
CBX4-203ENST00000494546 MRPS14O60783 128 aaKnown RBP26.26■■□□□ 1.79
CBX4-203ENST00000494546 IGHG2P01859 326 aa26.26■■□□□ 1.79
CBX4-203ENST00000494546 RANBP1P43487 201 aa26.26■■□□□ 1.79
CBX4-203ENST00000494546 SAMD5Q5TGI4 173 aa26.26■■□□□ 1.79
CBX4-203ENST00000494546 MOB1BQ7L9L4 216 aa26.26■■□□□ 1.79
CBX4-203ENST00000494546 FOXRED2Q8IWF2 684 aa26.26■■□□□ 1.79
CBX4-203ENST00000494546 OR2AK2Q8NG84 335 aa26.26■■□□□ 1.79
CBX4-203ENST00000494546 LIN7CQ9NUP9 197 aaKnown RBP26.26■■□□□ 1.79
CBX4-203ENST00000494546 HSF4Q9ULV5 492 aa26.26■■□□□ 1.79
CBX4-203ENST00000494546 MYL9P24844 172 aa26.25■■□□□ 1.79
CBX4-203ENST00000494546 OR10A3P58181 314 aa26.25■■□□□ 1.79
CBX4-203ENST00000494546 LSAMPQ13449 338 aa26.25■■□□□ 1.79
CBX4-203ENST00000494546 LY6G6FQ5SQ64 297 aa26.25■■□□□ 1.79
CBX4-203ENST00000494546 ODF3L1Q8IXM7 274 aa26.25■■□□□ 1.79
CBX4-203ENST00000494546 ARHGAP5-AS1Q96IT6 56 aa26.25■■□□□ 1.79
CBX4-203ENST00000494546 S1PR3Q99500 378 aa26.25■■□□□ 1.79
CBX4-203ENST00000494546 PLSCR3Q9NRY6 295 aa26.25■■□□□ 1.79
CBX4-203ENST00000494546 PLXNB1O43157 2135 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 TRAV1-2A0A0B4J238 106 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 TMEM272A0A1B0GTI8 110 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 TRDV1A0A1B0GX56 115 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 LINC01548A6NM66 108 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 FOXI3A8MTJ6 420 aaPredicted RBP26.24■■□□□ 1.79
CBX4-203ENST00000494546 DENRO43583 198 aaKnown RBP26.24■■□□□ 1.79
CBX4-203ENST00000494546 TMEM50BP56557 158 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 BEAN1Q3B7T3 259 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 CD200R1LQ6Q8B3 271 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 RASL11BQ9BPW5 248 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 PECRQ9BY49 303 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 ABCG5Q9H222 651 aa26.24■■□□□ 1.79
CBX4-203ENST00000494546 SHISA3A0PJX4 238 aa26.23■■□□□ 1.79
CBX4-203ENST00000494546 LDLRAD4O15165 306 aa26.23■■□□□ 1.79
CBX4-203ENST00000494546 GPR12P47775 334 aa26.23■■□□□ 1.79
CBX4-203ENST00000494546 OR3A3P47888 321 aa26.23■■□□□ 1.79
CBX4-203ENST00000494546 PLA2G7Q13093 441 aa26.23■■□□□ 1.79
CBX4-203ENST00000494546 SPARTQ8N0X7 666 aa26.23■■□□□ 1.79
CBX4-203ENST00000494546 OR8H1Q8NGG4 311 aa26.23■■□□□ 1.79
CBX4-203ENST00000494546 OR56B1Q8NGI3 324 aa26.23■■□□□ 1.79
CBX4-203ENST00000494546 MRPL20Q9BYC9 149 aaKnown RBP26.23■■□□□ 1.79
CBX4-203ENST00000494546 TRBV6-6A0A0A6YYG2 114 aa26.22■■□□□ 1.79
CBX4-203ENST00000494546 ST8SIA5O15466 376 aa26.22■■□□□ 1.79
CBX4-203ENST00000494546 PF4P02776 101 aa26.22■■□□□ 1.79
CBX4-203ENST00000494546 F2RL1P55085 397 aa26.22■■□□□ 1.79
CBX4-203ENST00000494546 OXLD1Q5BKU9 147 aa26.22■■□□□ 1.79
CBX4-203ENST00000494546 UBE2UQ5VVX9 321 aa26.22■■□□□ 1.79
CBX4-203ENST00000494546 STPG2Q8N412 459 aa26.22■■□□□ 1.79
CBX4-203ENST00000494546 C12orf4Q9NQ89 552 aa26.22■■□□□ 1.79
CBX4-203ENST00000494546 RAB22AQ9UL26 194 aa26.22■■□□□ 1.79
CBX4-203ENST00000494546 SAA2-SAA4A0A096LPE2 208 aa26.21■■□□□ 1.79
CBX4-203ENST00000494546 SAA2P0DJI9 122 aaPredicted RBP26.21■■□□□ 1.79
CBX4-203ENST00000494546 PSMB9P28065 219 aa26.21■■□□□ 1.79
CBX4-203ENST00000494546 SLC35B1P78383 322 aa26.21■■□□□ 1.79
CBX4-203ENST00000494546 C22orf42Q6IC83 251 aa26.21■■□□□ 1.79
CBX4-203ENST00000494546 ZNF833PQ6ZTB9 187 aa26.21■■□□□ 1.79
CBX4-203ENST00000494546 NABP2Q9BQ15 211 aa26.21■■□□□ 1.79
CBX4-203ENST00000494546 CMSS1Q9BQ75 279 aaKnown RBP26.21■■□□□ 1.79
CBX4-203ENST00000494546 IFI27L2Q9H2X8 130 aa26.21■■□□□ 1.79
CBX4-203ENST00000494546 AP4M1O00189 453 aa26.2■■□□□ 1.78
CBX4-203ENST00000494546 CD33P20138 364 aa26.2■■□□□ 1.78
CBX4-203ENST00000494546 HLA-DRB3P79483 266 aa26.2■■□□□ 1.78
CBX4-203ENST00000494546 PLAC9Q5JTB6 97 aa26.2■■□□□ 1.78
CBX4-203ENST00000494546 SLC23A1Q9UHI7 598 aa26.2■■□□□ 1.78
CBX4-203ENST00000494546 MGAT4AQ9UM21 535 aa26.2■■□□□ 1.78
CBX4-203ENST00000494546 IFITM5A6NNB3 132 aa26.19■■□□□ 1.78
CBX4-203ENST00000494546 RAB3BP20337 219 aa26.19■■□□□ 1.78
CBX4-203ENST00000494546 FAM71E2Q8N5Q1 922 aa26.19■■□□□ 1.78
CBX4-203ENST00000494546 YTHDF1Q9BYJ9 559 aaKnown RBP26.19■■□□□ 1.78
CBX4-203ENST00000494546 Q9N2K0 584 aa26.19■■□□□ 1.78
CBX4-203ENST00000494546 MMDQ15546 238 aa26.18■■□□□ 1.78
CBX4-203ENST00000494546 KPRPQ5T749 579 aaPredicted RBP26.18■■□□□ 1.78
CBX4-203ENST00000494546 PARP12Q9H0J9 701 aaKnown RBP26.18■■□□□ 1.78
CBX4-203ENST00000494546 OR1A1Q9P1Q5 309 aa26.18■■□□□ 1.78
CBX4-203ENST00000494546 HSPA12AO43301 675 aa26.17■■□□□ 1.78
CBX4-203ENST00000494546 SCTP09683 121 aa26.17■■□□□ 1.78
CBX4-203ENST00000494546 GALP22466 123 aa26.17■■□□□ 1.78
CBX4-203ENST00000494546 SOX6P35712 828 aa26.17■■□□□ 1.78
CBX4-203ENST00000494546 CEACAM6P40199 344 aa26.17■■□□□ 1.78
CBX4-203ENST00000494546 FCGR1BQ92637 280 aa26.17■■□□□ 1.78
CBX4-203ENST00000494546 HSPB9Q9BQS6 159 aa26.17■■□□□ 1.78
CBX4-203ENST00000494546 PIPOXQ9P0Z9 390 aa26.17■■□□□ 1.78
CBX4-203ENST00000494546 A0A0B4J203 849 aa26.16■■□□□ 1.78
CBX4-203ENST00000494546 SLC2A2P11168 524 aaPredicted RBP26.16■■□□□ 1.78
CBX4-203ENST00000494546 ZBTB25P24278 435 aa26.16■■□□□ 1.78
CBX4-203ENST00000494546 ACTBP60709 375 aa26.16■■□□□ 1.78
CBX4-203ENST00000494546 RPL23AP62750 156 aaKnown RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms