RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CD24P25063 80 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 BRS3P32247 399 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 CEACAM6P40199 344 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 MNDAP41218 407 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 KIR2DS4P43632 304 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 COMPP49747 757 aaPredicted RBP10.88□□□□□ -0.67
COL1A1-208ENST00000494334 RAB7AP51149 207 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 ARHGDIBP52566 201 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 GNG2P59768 71 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 ZNF816Q0VGE8 651 aaPredicted RBP10.88□□□□□ -0.67
COL1A1-208ENST00000494334 KIR2DS1Q14954 304 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 HERPUD1Q15011 391 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 Q6ZS49 121 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 DTX3Q8N9I9 347 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 OR4A4PQ8NGN8 299 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 SPATA3Q8NHX4 192 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 NUDCD2Q8WVJ2 157 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 BCL7BQ9BQE9 202 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 ABHD14AQ9BUJ0 271 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 OR1A1Q9P1Q5 309 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 SLC23A1Q9UHI7 598 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 COL6A5A8TX70 2615 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 IGKV1D-8A0A087WSZ0 117 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 A0A1W2PPI3 338 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 FAM90A9PA6NNJ1 464 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 XRCC3O43542 346 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 CHST1O43916 411 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 GAPDHP04406 335 aaKnown RBP10.87□□□□□ -0.67
COL1A1-208ENST00000494334 IL3RAP26951 378 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 REG1BP48304 166 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 ZNF137PP52743 207 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 PITPNAQ00169 270 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 FOXL1Q12952 345 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 FBLN7Q53RD9 439 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 IGSF11Q5DX21 431 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 DHRS7BQ6IAN0 325 aaPredicted RBP10.87□□□□□ -0.67
COL1A1-208ENST00000494334 LIAT1Q6ZQX7 453 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 Q6ZSV7 163 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 TMEM219Q86XT9 240 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 ODF3L1Q8IXM7 274 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 OR8H3Q8N146 312 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 LYG1Q8N1E2 194 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 OR2AK2Q8NG84 335 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 CFHR4Q92496 578 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 CMTM3Q96MX0 182 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 CABLES2Q9BTV7 478 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 ST6GALNAC5Q9BVH7 336 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 PARP12Q9H0J9 701 aaKnown RBP10.87□□□□□ -0.67
COL1A1-208ENST00000494334 AUNIPQ9H7T9 357 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 PITPNC1Q9UKF7 332 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 CEPT1Q9Y6K0 416 aa10.87□□□□□ -0.67
COL1A1-208ENST00000494334 IGHV1-3A0A0C4DH29 117 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 ITGB1BP1O14713 200 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 TIMM23O14925 209 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 ST8SIA5O15466 376 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 HSPA12AO43301 675 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 NDUFA7O95182 113 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 EIF4EP06730 217 aaKnown RBP10.86□□□□□ -0.67
COL1A1-208ENST00000494334 PTHLHP12272 177 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 AWAT1Q58HT5 328 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 MZT2AQ6P582 158 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 THNSL2Q86YJ6 484 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 DRAM1Q8N682 238 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 OR56B4Q8NH76 319 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 CAPSLQ8WWF8 208 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 RTN4IP1Q8WWV3 396 aaPredicted RBP10.86□□□□□ -0.67
COL1A1-208ENST00000494334 AP3S1Q92572 193 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 ISOC1Q96CN7 298 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 AGMATQ9BSE5 352 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 TOLLIPQ9H0E2 274 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 IFI27L2Q9H2X8 130 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 RAB18Q9NP72 206 aa10.86□□□□□ -0.67
COL1A1-208ENST00000494334 TRBV6-7A0A0A0MS04 114 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 H3BMQ9 156 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 BET1O15155 118 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 HPGDSO60760 199 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 TSPAN9O75954 239 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 APOA1P02647 267 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 ELK1P19419 428 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 MDKP21741 143 aaPredicted RBP10.85□□□□□ -0.67
COL1A1-208ENST00000494334 RAG2P55895 527 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 TAS2R20P59543 309 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 HABP2Q14520 560 aaPredicted RBP10.85□□□□□ -0.67
COL1A1-208ENST00000494334 TMEM69Q5SWH9 247 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 C12orf54Q6X4T0 127 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 MOB3BQ86TA1 216 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 TGIF2LXQ8IUE1 241 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 DYNC2LI1Q8TCX1 351 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 C11orf54Q9H0W9 315 aaPredicted RBP10.85□□□□□ -0.67
COL1A1-208ENST00000494334 RDH8Q9NYR8 311 aa10.85□□□□□ -0.67
COL1A1-208ENST00000494334 IGHV3-72A0A0B4J1Y9 119 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 LANCL1O43813 399 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 NOL3O60936 208 aaKnown RBP10.84□□□□□ -0.67
COL1A1-208ENST00000494334 DIRAS3O95661 229 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 HLA-DQB1P01920 261 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 SNRNP70P08621 437 aaKnown RBP10.84□□□□□ -0.67
COL1A1-208ENST00000494334 FAM106CPP0CH98 169 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 SOX6P35712 828 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 OR3A3P47888 321 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 ZNF833PQ6ZTB9 187 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms