RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 RBFOX1Q9NWB1 397 aaKnown RBP4.03□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF446Q9NWS9 450 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF580Q9UK33 172 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 OR52A1Q9UKL2 312 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 HHLA2Q9UM44 414 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 SLC7A11Q9UPY5 501 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 LINC00312Q9Y6C7 94 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 V9GYS6 101 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 DNAH9Q9NYC9 4486 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 CCDC182A6NF36 153 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 SERPINE3A8MV23 424 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 LOC110117498-PIK3R3F6TDL0 507 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 H0YHG0 523 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 C3orf84H3BNL1 204 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 LY6LH3BQJ8 138 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 BUB1B-PAK6H3BSN5 160 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 M0R129 80 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 CCL24O00175 119 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 BUB3O43684 328 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 PRKYO43930 277 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 SNX3O60493 162 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 IGLV1-47P01700 117 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 PRKACAP17612 351 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 BCL3P20749 454 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 NFYBP25208 207 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 MYCNOSP40205 109 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 MNDAP41218 407 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 NKX2-1P43699 371 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-219ENST00000494323 OR3A1P47881 315 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 CDX1P47902 265 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-219ENST00000494323 LUMP51884 338 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-219ENST00000494323 PRRX1P54821 245 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 ERVFC1-1P60608 527 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 RPL36AP83881 106 aaKnown RBP4.02□□□□□ -1.77
PTCD3-219ENST00000494323 DIAPH2-AS1Q14236 149 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 HES1Q14469 280 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 DEFB136Q30KP8 78 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 C2orf76Q3KRA6 126 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 KLHL22Q53GT1 634 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 CASC10Q5T4H9 136 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 TPTE2P1Q5T6R2 138 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 LCN1P1Q5VSP4 162 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 SLX4IPQ5VYV7 408 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 OR52W1Q6IF63 320 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 OR2W3Q7Z3T1 314 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 ZNF695Q8IW36 515 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 FAM58AQ8N1B3 248 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 KLHL30-AS1Q8NEE0 82 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 OR51D1Q8NGF3 324 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 ZNF596Q8TC21 504 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 ASB17Q8WXJ9 295 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 ITFG2Q969R8 447 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 P2RX4Q99571 388 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 TBX5Q99593 518 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 DCLRE1BQ9H816 532 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 ZNF556Q9HAH1 456 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 ZNF286AQ9HBT8 521 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 MRM2Q9UI43 246 aaKnown RBP4.02□□□□□ -1.77
PTCD3-219ENST00000494323 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.02□□□□□ -1.77
PTCD3-219ENST00000494323 GSTK1Q9Y2Q3 226 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 R4GMQ9 66 aa4.02□□□□□ -1.77
PTCD3-219ENST00000494323 IGLV5-45A0A087WSX0 123 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 TRGV10A0A0A0MS01 117 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 A0A1W2PPE3 182 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 SMIM30A4D0T7 59 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 M0QZK8 103 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 SH2D1BO14796 132 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 SYT7O43581 403 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 RAMP3O60896 148 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 ENTPD6O75354 484 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 E2F6O75461 281 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 OR2H2O95918 312 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 SERPINA3P01011 423 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 CEACAM3P40198 252 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 POU3F4P49335 361 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 ARHGDIBP52566 201 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 CRISP1P54107 249 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 ATP1B3P54709 279 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 ACTR3P61158 418 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 PTGES3Q15185 160 aaKnown RBP4.01□□□□□ -1.77
PTCD3-219ENST00000494323 C17orf58Q2M2W7 97 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 HLA-DRB5Q30154 266 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 HEPN1Q6WQI6 88 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 KCTD9Q7L273 389 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 SSX6Q7RTT6 188 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 RTN4RL2Q86UN3 420 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 SLC35F2Q8IXU6 374 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 DRAM1Q8N682 238 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 TCEANCQ8N8B7 351 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 YIPF7Q8N8F6 280 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 OR4D6Q8NGJ1 314 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 OR56B4Q8NH76 319 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 RFESDQ8TAC1 157 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 CHPT1Q8WUD6 406 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 CANT1Q8WVQ1 401 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 LEAP2Q969E1 77 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 RFT1Q96AA3 541 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 RBMXL1Q96E39 390 aaKnown RBP4.01□□□□□ -1.77
PTCD3-219ENST00000494323 BORCS8Q96FH0 119 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms