RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SLC35F2Q8IXU6 374 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 SLC22A24Q8N4F4 322 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 JAGN1Q8N5M9 183 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 ASB10Q8WXI3 467 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 BTF3L4Q96K17 158 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 FAM210BQ96KR6 192 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 URM1Q9BTM9 101 aaKnown RBP6.9□□□□□ -1.3
HDAC6-234ENST00000493923 MRPL13Q9BYD1 178 aaKnown RBP6.9□□□□□ -1.3
HDAC6-234ENST00000493923 CTDSP1Q9GZU7 261 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 EIF5A2Q9GZV4 153 aaKnown RBP6.9□□□□□ -1.3
HDAC6-234ENST00000493923 RAB1BQ9H0U4 201 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 OR52D1Q9H346 318 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 DYNLRB1Q9NP97 96 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 KCNS2Q9ULS6 477 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 ZFP30Q9Y2G7 519 aa6.9□□□□□ -1.3
HDAC6-234ENST00000493923 TRAV18A0A075B6X5 111 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 A6NIZ1 184 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 BHLHE40O14503 412 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 SYNGR3O43761 229 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 GPANK1O95872 356 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 ARG1P05089 322 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 SRD5A1P18405 259 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 MAKP20794 623 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 SLC6A6P31641 620 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 TAGLN2P37802 199 aaKnown RBP6.89□□□□□ -1.31
HDAC6-234ENST00000493923 WNT5AP41221 380 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 GLIPR1P48060 266 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 CAMLGP49069 296 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 UBE2KP61086 200 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 PRDX4Q13162 271 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 ELOBQ15370 118 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 RAB11BQ15907 218 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 ARSJQ5FYB0 599 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-234ENST00000493923 OTPQ5XKR4 325 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 FBXW12Q6X9E4 464 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 ZSCAN4Q8NAM6 433 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-234ENST00000493923 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
HDAC6-234ENST00000493923 NOXO1Q8NFA2 376 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 OR10G4Q8NGN3 311 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 OR13C5Q8NGS8 318 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 OR13C2Q8NGS9 318 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 OR1P1Q8NH06 330 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 CLDND2Q8NHS1 167 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 NEU4Q8WWR8 484 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-234ENST00000493923 TMEM158Q8WZ71 300 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 MCHR2Q969V1 340 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 PTX4Q96A99 478 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 NABP1Q96AH0 204 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 TVP23CQ96ET8 276 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 PELI1Q96FA3 418 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 SLC25A44Q96H78 314 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-234ENST00000493923 SEC22AQ96IW7 307 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 C2orf50Q96LR7 162 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 C19orf24Q9BVV8 132 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 CHST6Q9GZX3 395 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 ARV1Q9H2C2 271 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 LPAR2Q9HBW0 351 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 OR5AC2Q9NZP5 309 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 IL20RAQ9UHF4 553 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 MMP24Q9Y5R2 645 aa6.89□□□□□ -1.31
HDAC6-234ENST00000493923 TRBV24-1A0A075B6N3 115 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 LOC100509620A0A075B734 347 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 TRBV5-5A0A0J9YX44 114 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 C20orf202A1L168 122 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 CYB5BO43169 146 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 OR6A2O95222 327 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 DIRAS3O95661 229 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 OPN1MWP04001 364 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 CHRM2P08172 466 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 NPSP0C0P6 89 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 OR8U9P0C7N5 309 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 ZNF735P0CB33 412 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 TRGC1P0CF51 173 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 OPN1MW2P0DN77 364 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 OPN1MW3P0DN78 364 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 RAB6AP20340 208 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 OR10J1P30954 320 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 MPV17P39210 176 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 RND2P52198 227 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 ZNF133P52736 654 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-234ENST00000493923 LMO4P61968 165 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 SELENOTP62341 195 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 RBX1P62877 108 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 HERPUD1Q15011 391 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 KCNMB1Q16558 191 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 MIDNQ504T8 468 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 TP53I3Q53FA7 332 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 SPATA46Q5T0L3 261 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 ZNF774Q6NX45 483 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 SLC25A47Q6Q0C1 308 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 C1orf229Q6ZS94 237 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-234ENST00000493923 FOXRED2Q8IWF2 684 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 NRMQ8IXM6 262 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 ZNF101Q8IZC7 436 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 SLC35G3Q8N808 338 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 LRRC75AQ8NAA5 344 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 OR8U1Q8NH10 309 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 ORAOV1Q8WV07 137 aa6.88□□□□□ -1.31
HDAC6-234ENST00000493923 TMEM239Q8WW34 195 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms