RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 Q6ZPA2 131 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 LINC00299Q6ZSB3 139 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 C9orf139Q6ZV77 190 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 Q8N402 240 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 C8orf31Q8N9H6 132 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 OR52I2Q8NH67 350 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 ZNF418Q8TF45 676 aaPredicted RBP6.19□□□□□ -1.42
VEGFA-214ENST00000493786 FAM216AQ8WUB2 273 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 S100ZQ8WXG8 99 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 C22orf15Q8WYQ4 148 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 TOMM40LQ969M1 308 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 RPEQ96AT9 228 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 ABHD1Q96SE0 405 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 RDH8Q9NYR8 311 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 TAS2R8Q9NYW2 309 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 EHFQ9NZC4 300 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 OR1A1Q9P1Q5 309 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 DPM3Q9P2X0 92 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 MTFP1Q9UDX5 166 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 ZNF221Q9UK13 617 aa6.19□□□□□ -1.42
VEGFA-214ENST00000493786 IGKV1D-8A0A087WSZ0 117 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 TRBV6-7A0A0A0MS04 114 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 IGKV1-6A0A0C4DH72 117 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 A0A0U1RQK1 487 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 A0A1W2PPE3 182 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 BUB1B-PAK6H3BSN5 160 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 GSTZ1O43708 216 aaPredicted RBP6.18□□□□□ -1.42
VEGFA-214ENST00000493786 IFNA2P01563 188 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 PMP2P02689 132 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 OR5H8P0DN80 308 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 NAT1P18440 290 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 TBPP20226 339 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 HRH1P35367 487 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 FAUP35544 74 aaKnown RBP6.18□□□□□ -1.42
VEGFA-214ENST00000493786 ETV6P41212 452 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 LUMP51884 338 aaPredicted RBP6.18□□□□□ -1.42
VEGFA-214ENST00000493786 HERV-K104P61576 105 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 TSPAN5P62079 268 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 HERPUD1Q15011 391 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 RNASE10Q5GAN6 216 aaKnown RBP6.18□□□□□ -1.42
VEGFA-214ENST00000493786 KIAA2026Q5HYC2 2103 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 LY6G6FQ5SQ64 297 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 TRIQKQ629K1 86 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 SLC25A48Q6ZT89 311 aaKnown RBP6.18□□□□□ -1.42
VEGFA-214ENST00000493786 C5orf24Q7Z6I8 188 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 TMEM17Q86X19 198 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 LYG1Q8N1E2 194 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 LINC00311Q8N616 119 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 GDPD1Q8N9F7 314 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 OR4P4Q8NGL7 312 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 SNAPC3Q92966 411 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 MALSU1Q96EH3 234 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 JMJD8Q96S16 334 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 S1PR3Q99500 378 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 SLC6A7Q99884 636 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 WDR12Q9GZL7 423 aaKnown RBP6.18□□□□□ -1.42
VEGFA-214ENST00000493786 GHITMQ9H3K2 345 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 ABCB10Q9NRK6 738 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 PIPOXQ9P0Z9 390 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 KLK11Q9UBX7 282 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 ZNF107Q9UII5 783 aaPredicted RBP6.18□□□□□ -1.42
VEGFA-214ENST00000493786 ANAPC10Q9UM13 185 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 HILPDAQ9Y5L2 63 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 V9GYH0 126 aa6.18□□□□□ -1.42
VEGFA-214ENST00000493786 OOSP1A8MZH6 123 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 ITGB1BP1O14713 200 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 HSD17B6O14756 317 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 RAB29O14966 203 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 SLC31A2O15432 143 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 ST8SIA5O15466 376 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 TXNL1O43396 289 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 SLC22A5O76082 557 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 IGLV1-47P01700 117 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 GAPDHP04406 335 aaKnown RBP6.17□□□□□ -1.42
VEGFA-214ENST00000493786 NFYAP23511 347 aaPredicted RBP6.17□□□□□ -1.42
VEGFA-214ENST00000493786 FCGR2CP31995 323 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 BRS3P32247 399 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 GPR12P47775 334 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 MEF2DQ14814 521 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 SSX2Q16385 188 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 DEFB112Q30KQ8 113 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 CT45A1Q5HYN5 189 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 TPTE2P1Q5T6R2 138 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 FAM53AQ6NSI3 398 aaPredicted RBP6.17□□□□□ -1.42
VEGFA-214ENST00000493786 LHFPL4Q7Z7J7 247 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 TGIF2LXQ8IUE1 241 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 H1FOOQ8IZA3 346 aaPredicted RBP6.17□□□□□ -1.42
VEGFA-214ENST00000493786 TOMM5Q8N4H5 51 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 TMEM229BQ8NBD8 167 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 ZNF439Q8NDP4 499 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 CT45A3Q8NHU0 189 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 SOSTQ9BQB4 213 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 THAP7Q9BT49 309 aaPredicted RBP6.17□□□□□ -1.42
VEGFA-214ENST00000493786 TOLLIPQ9H0E2 274 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 C11orf54Q9H0W9 315 aaPredicted RBP6.17□□□□□ -1.42
VEGFA-214ENST00000493786 OR2D2Q9H210 308 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 DPAGT1Q9H3H5 408 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 OR2W1Q9Y3N9 320 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 DSCAML1Q8TD84 2053 aa6.17□□□□□ -1.42
VEGFA-214ENST00000493786 SONP18583 2426 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms