RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 KCNIP1Q9NZI2 227 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 JPT1Q9UK76 154 aa13.46□□□□□ -0.25
COL9A1-210ENST00000493682 TRBV5-7A0A0A0MS05 114 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 A0A1W2PPK0 400 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 SAP30O75446 220 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 GLAP06280 429 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 MGMTP16455 207 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 MYL12AP19105 171 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 FUT3P21217 361 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 AWAT2Q6E213 333 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 LIN54Q6MZP7 749 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 ZNF554Q86TJ5 538 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 DLX4Q92988 240 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-210ENST00000493682 PGLYRP3Q96LB9 341 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 Q96M66 194 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 OR14A2Q96R54 314 aa13.45□□□□□ -0.26
COL9A1-210ENST00000493682 DIMT1Q9UNQ2 313 aaKnown RBP13.45□□□□□ -0.26
COL9A1-210ENST00000493682 EXOSC1Q9Y3B2 195 aaKnown RBP13.45□□□□□ -0.26
COL9A1-210ENST00000493682 IRGMA1A4Y4 181 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 CRTAPO75718 401 aaPredicted RBP13.44□□□□□ -0.26
COL9A1-210ENST00000493682 FRMD6-AS1P0C7T7 363 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 SPNP16150 400 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 OR3A3P47888 321 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 SLURP1P55000 103 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 HTD2P86397 168 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 GABPB1Q06547 395 aaPredicted RBP13.44□□□□□ -0.26
COL9A1-210ENST00000493682 C19orf54Q5BKX5 351 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 ZNF833PQ6ZTB9 187 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 LYPD6Q86Y78 171 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 CDH26Q8IXH8 852 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 NPBQ8NG41 125 aa13.44□□□□□ -0.26
COL9A1-210ENST00000493682 MRPL30Q8TCC3 161 aaKnown RBP13.44□□□□□ -0.26
COL9A1-210ENST00000493682 HUWE1Q7Z6Z7 4374 aaKnown RBP13.43□□□□□ -0.26
COL9A1-210ENST00000493682 SAA2-SAA4A0A096LPE2 208 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 SOX15O60248 233 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 YPEL1O60688 119 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 NDUFA3O95167 84 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 MAS1P04201 325 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 SAA2P0DJI9 122 aaPredicted RBP13.43□□□□□ -0.26
COL9A1-210ENST00000493682 NDPQ00604 133 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 LY6G6FQ5SQ64 297 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 ZNF485Q8NCK3 441 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 ZNF555Q8NEP9 628 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 YPEL2Q96QA6 119 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 TOLLIPQ9H0E2 274 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 CST11Q9H112 138 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 KIAA1456Q9P272 454 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 ERGIC3Q9Y282 383 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 FBXO7Q9Y3I1 522 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 SORL1Q92673 2214 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 TENM2Q9NT68 2774 aa13.43□□□□□ -0.26
COL9A1-210ENST00000493682 DNAH7Q8WXX0 4024 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 A0A1W2PN81 502 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 LINC01619G3V211 115 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 PDCD6O75340 191 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 RGS11O94810 467 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 GP9P14770 177 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 CHRNA7P36544 502 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 ECSCRQ19T08 205 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 C10orf67Q8IYJ2 551 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 PQLC1Q8N2U9 271 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 CASTOR1Q8WTX7 329 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 GALMQ96C23 342 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 S100A14Q9HCY8 104 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 TPSG1Q9NRR2 321 aa13.42□□□□□ -0.26
COL9A1-210ENST00000493682 FOXA2Q9Y261 457 aaPredicted RBP13.42□□□□□ -0.26
COL9A1-210ENST00000493682 PNMA8CA0A1B0GUJ8 204 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 LGALS1P09382 135 aaKnown RBP13.41□□□□□ -0.26
COL9A1-210ENST00000493682 LYL1P12980 280 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 CAPGP40121 348 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 CRIP2P52943 208 aaPredicted RBP13.41□□□□□ -0.26
COL9A1-210ENST00000493682 C6orf141Q5SZD1 244 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 ZNF660Q6AZW8 331 aaPredicted RBP13.41□□□□□ -0.26
COL9A1-210ENST00000493682 ACSM6Q6P461 480 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 OR2AK2Q8NG84 335 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 ARPC1AQ92747 370 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 FAM46BQ96A09 425 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 TMEM80Q96HE8 168 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 DERL3Q96Q80 235 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 IFI27L2Q9H2X8 130 aa13.41□□□□□ -0.26
COL9A1-210ENST00000493682 SMPD3Q9NY59 655 aaPredicted RBP13.41□□□□□ -0.26
COL9A1-210ENST00000493682 RYR2Q92736 4967 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 IGHV4OR15-8A0A075B7B6 117 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 A0A087WW49 117 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 TRIM64CA6NLI5 447 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 BAG2O95816 211 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 CX3CL1P78423 397 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 MED21Q13503 144 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 DOC2BQ14184 412 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 LRRC36Q1X8D7 754 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 FAM71F2Q6NXP2 309 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 FAM131AQ6UXB0 335 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 OR6Q1Q8NGQ2 317 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 UQCC2Q9BRT2 126 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 GHITMQ9H3K2 345 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 FBXL15Q9H469 300 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 ZMAT4Q9H898 229 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 LRRC42Q9Y546 428 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 A3GALT2U3KPV4 340 aa13.4□□□□□ -0.26
COL9A1-210ENST00000493682 FCN1O00602 326 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms