RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 KLK11Q9UBX7 282 aa2.22□□□□□ -2.05
PTCD3-218ENST00000493430 CLN8Q9UBY8 286 aa2.22□□□□□ -2.05
PTCD3-218ENST00000493430 OR5V1Q9UGF6 321 aa2.22□□□□□ -2.05
PTCD3-218ENST00000493430 MRM2Q9UI43 246 aaKnown RBP2.22□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF222Q9UK12 451 aa2.22□□□□□ -2.05
PTCD3-218ENST00000493430 IKZF2Q9UKS7 526 aa2.22□□□□□ -2.05
PTCD3-218ENST00000493430 NUP50Q9UKX7 468 aa2.22□□□□□ -2.05
PTCD3-218ENST00000493430 RABL2BQ9UNT1 228 aa2.22□□□□□ -2.05
PTCD3-218ENST00000493430 MAB21L2Q9Y586 359 aa2.22□□□□□ -2.05
PTCD3-218ENST00000493430 SORL1Q92673 2214 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 TENM3Q9P273 2699 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 MEGF8Q7Z7M0 2845 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 TRRAPQ9Y4A5 3859 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 A0A0B4J203 849 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 TRAV24A0A0B4J272 114 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 IGHV1-69DA0A0B4J2H0 117 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 IGHV3-16A0A0C4DH30 117 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 IGKV1-12A0A0C4DH73 117 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PNMA8CA0A1B0GUJ8 204 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 LOC107986453A0A1B0GWG9 222 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 FAM230AA0A1W2PPH8 454 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 A0A1W2PPK0 400 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 TMEM89A2RUT3 159 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 CENPBD1B2RD01 187 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 G3V4G9 280 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 H3BUX3 64 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 LGALS8O00214 317 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 SIRPB1O00241 398 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 GNGT2O14610 69 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 EI24O14681 340 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 GYG2O15488 501 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PRAF2O60831 178 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 GMNNO75496 209 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 LALBAP00709 142 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 NPPAP01160 153 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PTHP01270 115 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 IGF2P01344 180 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 IGKV1D-12P01611 117 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 IGHV1-69P01742 117 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 LYNP07948 512 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 COX5BP10606 129 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PSG2P11465 335 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 CALB2P22676 271 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PRTN3P24158 256 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 CRABP1P29762 137 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 FMO3P31513 532 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 IFNA8P32881 189 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 VHLP40337 213 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 POU3F4P49335 361 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 SRP9P49458 86 aaKnown RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 GTF2A1P52655 376 aaPredicted RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 SLC25A1P53007 311 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 CRISP1P54107 249 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 RAG2P55895 527 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 TMEM33P57088 247 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 CXCR4P61073 352 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PCBD1P61457 104 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 ESRRGP62508 458 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 CDK5Q00535 292 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 SLC34A1Q06495 639 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 INSL4Q14641 139 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PTGES3Q15185 160 aaKnown RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 LRRC36Q1X8D7 754 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 NSUN5P1Q3KNT7 163 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 TMEM155Q4W5P6 130 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PRAMEF5Q5TYX0 476 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 C12orf73Q69YU5 71 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 FAHD1Q6P587 224 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 DNM1P34Q6PK57 102 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 ASRGL1Q7L266 308 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 HDDC2Q7Z4H3 204 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 AQP12AQ8IXF9 295 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 SPICQ8N5J4 248 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 LRTM2Q8N967 370 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 OR2T33Q8NG76 320 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 OR10H4Q8NGA5 316 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 OR10K1Q8NGX5 313 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 OR2T4Q8NH00 348 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 OTOSQ8NHW6 89 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 NANPQ8TBE9 248 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 RNASE8Q8TDE3 154 aaKnown RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF418Q8TF45 676 aaPredicted RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 RNF133Q8WVZ7 376 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 APH1BQ8WW43 257 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 OR5P3Q8WZ94 311 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 TNFRSF14Q92956 283 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 SPTSSAQ969W0 71 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 C11orf52Q96A22 123 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 TMIGD2Q96BF3 282 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 ASB9Q96DX5 294 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 ADAT3Q96EY9 351 aaPredicted RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 DUS3LQ96G46 650 aaKnown RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 RNF170Q96K19 258 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 SLC29A1Q99808 456 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PBOV1Q9GZY1 135 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 MOB1AQ9H8S9 216 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 ISG20L2Q9H9L3 353 aaKnown RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 SLC25A19Q9HC21 320 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 CMC2Q9NRP2 79 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 RBFOX1Q9NWB1 397 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms