RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 C12orf54Q6X4T0 127 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 LYG1Q8N1E2 194 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 OR2AK2Q8NG84 335 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 CAPSLQ8WWF8 208 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 MAFIPQ8WZ33 124 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 ABHD14AQ9BUJ0 271 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 RAB18Q9NP72 206 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 C1RLQ9NZP8 487 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 CUBNO60494 3623 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 HSD17B6O14756 317 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 XRCC3O43542 346 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 GSTT2P0CG29 244 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 GSTT2BP0CG30 244 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 DTYMKP23919 212 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 SOX6P35712 828 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 REG1BP48304 166 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 SPCS2Q15005 226 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 SRSF7Q16629 238 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCM2-217ENST00000492883 LY6G6FQ5SQ64 297 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 LIAT1Q6ZQX7 453 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 MOB3BQ86TA1 216 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 TMEM219Q86XT9 240 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 OR8H3Q8N146 312 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 DTX3Q8N9I9 347 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 OR4A4PQ8NGN8 299 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 SPATA3Q8NHX4 192 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 NUDCD2Q8WVJ2 157 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 BCL7BQ9BQE9 202 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 OR1A1Q9P1Q5 309 aa11.24□□□□□ -0.61
CCM2-217ENST00000492883 SMIM31A0A1B0GVY4 71 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 A6NDX4 124 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 CCDC160A6NGH7 325 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 TIMM23O14925 209 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 BET1O15155 118 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 FAM106CPP0CH98 169 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 RAG2P55895 527 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 ZNF816Q0VGE8 651 aaPredicted RBP11.23□□□□□ -0.61
CCM2-217ENST00000492883 AWAT1Q58HT5 328 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 IGSF11Q5DX21 431 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 TMEM69Q5SWH9 247 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 CCBE1Q6UXH8 406 aaPredicted RBP11.23□□□□□ -0.61
CCM2-217ENST00000492883 TGIF2LXQ8IUE1 241 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 DRAM1Q8N682 238 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 OR4F5Q8NH21 305 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 OR56B4Q8NH76 319 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 CMTM3Q96MX0 182 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 AUNIPQ9H7T9 357 aa11.23□□□□□ -0.61
CCM2-217ENST00000492883 IGHV1-3A0A0C4DH29 117 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 IGKV1-6A0A0C4DH72 117 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 A0A1W2PPI3 338 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 FAM25AB3EWG3 89 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 FAM25CB3EWG5 89 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 FAM25GB3EWG6 89 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 ST8SIA5O15466 376 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 HPGDSO60760 199 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 NDUFA7O95182 113 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 APOA1P02647 267 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 EIF4EP06730 217 aaKnown RBP11.22□□□□□ -0.61
CCM2-217ENST00000492883 RELBQ01201 579 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 HES1Q14469 280 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 OR10J5Q8NHC4 309 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 RTN4IP1Q8WWV3 396 aaPredicted RBP11.22□□□□□ -0.61
CCM2-217ENST00000492883 EDARADDQ8WWZ3 215 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 ST6GALNAC6Q969X2 333 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 BEX1Q9HBH7 125 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 RDH8Q9NYR8 311 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 PIPOXQ9P0Z9 390 aa11.22□□□□□ -0.61
CCM2-217ENST00000492883 MRPS7Q9Y2R9 242 aaKnown RBP11.22□□□□□ -0.61
CCM2-217ENST00000492883 IGKV1D-8A0A087WSZ0 117 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 IGHV3-72A0A0B4J1Y9 119 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 ITGB1BP1O14713 200 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 TXNL1O43396 289 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 CHST1O43916 411 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 SSX5O60225 188 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 SNRNP70P08621 437 aaKnown RBP11.21□□□□□ -0.61
CCM2-217ENST00000492883 PTHLHP12272 177 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 MDKP21741 143 aaPredicted RBP11.21□□□□□ -0.61
CCM2-217ENST00000492883 COMPP49747 757 aaPredicted RBP11.21□□□□□ -0.61
CCM2-217ENST00000492883 ZNF137PP52743 207 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 TAS2R20P59543 309 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 HERPUD1Q15011 391 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 Q6ZS49 121 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 Q6ZSV7 163 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 THNSL2Q86YJ6 484 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 C3orf56Q8N813 242 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 ISOC1Q96CN7 298 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 AKR1E2Q96JD6 320 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 GINS4Q9BRT9 223 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 NPFFR1Q9GZQ6 430 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 PARP12Q9H0J9 701 aaKnown RBP11.21□□□□□ -0.61
CCM2-217ENST00000492883 C11orf54Q9H0W9 315 aaPredicted RBP11.21□□□□□ -0.61
CCM2-217ENST00000492883 RNF150Q9ULK6 438 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 CEPT1Q9Y6K0 416 aa11.21□□□□□ -0.61
CCM2-217ENST00000492883 TRBV6-7A0A0A0MS04 114 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 A0A1B0GUS0 222 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 FAM90A9PA6NNJ1 464 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 H3BMQ9 156 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 RAB29O14966 203 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 LANCL1O43813 399 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 CTXN2P0C2S0 81 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms