RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 LYRM2Q9NU23 88 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ST8SIA5O15466 376 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 IGLV3-1P01715 115 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 LHX2P50458 406 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 Q3ZCU0 254 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 C1QTNF5Q9BXJ0 243 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 GPR61Q9BZJ8 451 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 KLRC4-KLRK1H3BQV0 150 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ARR3P36575 388 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SOX8P57073 446 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 PPP1CBP62140 327 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ZDHHC16Q969W1 377 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 TVP23CQ96ET8 276 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 NTN3O00634 580 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 RAMP3O60896 148 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CLN5O75503 358 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 IFNA10P01566 189 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 LYL1P12980 280 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 TRA2AQ13595 282 aaKnown RBP eCLIP12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 HES3Q5TGS1 186 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OR4C12Q96R67 309 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ATP5SQ99766 215 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 RTL8AQ9BWD3 113 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 UNKLQ9H9P5 680 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 COA4Q9NYJ1 87 aa12.92□□□□□ -0.34
TNFRSF1B-203ENST00000492361 IGHV3OR15-7A0A075B7D8 119 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 PQLC2LA1A4F0 135 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 AP4M1O00189 453 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 IGHEP01854 428 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CXCL1P09341 107 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 RAB5CP51148 216 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 RTP5Q14D33 572 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 RIPPLY2Q5TAB7 128 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SCCPDHQ8NBX0 429 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 LFNGQ8NES3 379 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 TMEM37Q8WXS4 190 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 LAMP3Q9UQV4 416 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 MAP1LC3B2A6NCE7 125 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 K7N7A8 449 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 NKX2-8O15522 239 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CLDN18P56856 261 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 HLA-DRB3P79483 266 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ARL16Q0P5N6 197 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OR5A2Q8NGI9 324 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 GATAD1Q8WUU5 269 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 MAP1LC3BQ9GZQ8 125 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 IFNA4P05014 189 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SSTR5P35346 364 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CHRNA7P36544 502 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 HBG1P69891 147 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 HBG2P69892 147 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SLC38A11Q08AI6 406 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 USF2Q15853 346 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 MRPL30Q8TCC3 161 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 Q8WTZ3 238 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 NANOS1Q8WY41 292 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 TOLLIPQ9H0E2 274 aa12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CHD3Q12873 2000 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SH2D1BO14796 132 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 PPP1R2P9O14990 202 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 GFRA1P56159 465 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ABLIM2Q6H8Q1 611 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 UBALD2Q8IYN6 164 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CCDC54Q8NEL0 328 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 RNF138Q8WVD3 245 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 DOK5Q9P104 306 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 NDUFA2O43678 99 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 DFFBO76075 338 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 FGFRL1Q8N441 504 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 RHOVQ96L33 236 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ATMQ13315 3056 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 PITX3O75364 302 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CTXN2P0C2S0 81 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 FGF7P21781 194 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ZNF766Q5HY98 468 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SPNS3Q6ZMD2 512 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 FAM185AQ8N0U4 392 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 POM121L2Q96KW2 1035 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 PRDM14Q9GZV8 571 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 TAAR3PQ9P1P4 343 aa12.9□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SP1P08047 785 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 EIF2S3P41091 472 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ERVFRD-1P60508 538 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 FAM201AQ5SY85 155 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 CDPF1Q6NVV7 123 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 H2BFWTQ7Z2G1 175 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 SSX3Q99909 188 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PATZ1Q9HBE1 687 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ZNF391Q9UJN7 358 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ZGRF1Q86YA3 2104 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ZNF610Q8N9Z0 462 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 OR2Z1Q8NG97 314 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 WDYHV1Q96HA8 205 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 RBKSQ9H477 322 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 YLPM1P49750 1951 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 LAMA5O15230 3695 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ZNF737O75373 536 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PGA5P0DJD9 388 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 GLIPR1P48060 266 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms