RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 LSM2Q9Y333 95 aaKnown RBP6.57□□□□□ -1.36
APOBEC3F-204ENST00000491387 STARD9Q9P2P6 4700 aa6.57□□□□□ -1.36
APOBEC3F-204ENST00000491387 A0A0A6YYD4 124 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 LCE6AA0A183 80 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 UBE2QL1A1L167 161 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 C12orf77C9JDV5 145 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 SDCBPO00560 298 aaPredicted RBP6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 MAGEB3O15480 346 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 LANCL1O43813 399 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 ZNF780AO75290 641 aaPredicted RBP6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 GPX5O75715 221 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 MT-ND4P03905 459 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 CSTBP04080 98 aaKnown RBP6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 ZNF134P52741 427 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 F2RL1P55085 397 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 WNT4P56705 351 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 ZNF616Q08AN1 781 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 PLA2G7Q13093 441 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 MPV17LQ2QL34 196 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 YIF1BQ5BJH7 314 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 AWAT2Q6E213 333 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 ZNF773Q6PK81 442 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 ZNF497Q6ZNH5 498 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 LRRTM1Q86UE6 522 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 PRR18Q8N4B5 295 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 STX19Q8N4C7 294 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 MINDY2Q8NBR6 621 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 OR1N2Q8NGR9 330 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 NEK7Q8TDX7 302 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 ARL11Q969Q4 196 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 RCHY1Q96PM5 261 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 NICN1Q9BSH3 213 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 TMED9Q9BVK6 235 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 SELENOIQ9C0D9 397 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 VCX3AQ9NNX9 186 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 RAB9BQ9NP90 201 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 RCC2Q9P258 522 aaKnown RBP6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 VSIG4Q9Y279 399 aa6.56□□□□□ -1.36
APOBEC3F-204ENST00000491387 EFCAB10A6NFE3 127 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 PTGES3LE9PB15 166 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 AIPO00170 330 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 MYL12BO14950 172 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 HLA-DRB1P01911 266 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 CDK1P06493 297 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 MGMTP16455 207 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 CNTFRP26992 372 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 CRIP2P52943 208 aaPredicted RBP6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 UNC119Q13432 240 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 LSAMPQ13449 338 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 C19orf54Q5BKX5 351 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 CT45A1Q5HYN5 189 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 SYT6Q5T7P8 510 aaPredicted RBP6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 RAB12Q6IQ22 244 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 GPR141Q7Z602 305 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 ZNF554Q86TJ5 538 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 OR52L2PQ8NGH6 319 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 CT45A3Q8NHU0 189 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 MRPL30Q8TCC3 161 aaKnown RBP6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 RITA1Q96K30 269 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 Q96M66 194 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 CITED4Q96RK1 184 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 SULT4A1Q9BR01 284 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 HDHD3Q9BSH5 251 aaPredicted RBP6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 PARP12Q9H0J9 701 aaKnown RBP6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 KLK15Q9H2R5 256 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 SPACA1Q9HBV2 294 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 PLCXD1Q9NUJ7 323 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 SCN3BQ9NY72 215 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 CNOT2Q9NZN8 540 aaKnown RBP6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 ZNF107Q9UII5 783 aaPredicted RBP6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 TPRKBQ9Y3C4 175 aa6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 EPPK1P58107 5090 aaKnown RBP6.55□□□□□ -1.36
APOBEC3F-204ENST00000491387 CSMD3Q7Z407 3707 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 IRGMA1A4Y4 181 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 A8MZ25 164 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 MRPS14O60783 128 aaKnown RBP6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 CA11O75493 328 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 CRTAPO75718 401 aaPredicted RBP6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 HBZP02008 142 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 GLAP06280 429 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 FRMD6-AS1P0C7T7 363 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 LYL1P12980 280 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 MAP2K4P45985 399 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 RAB9AP51151 201 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 RPS25P62851 125 aaKnown RBP6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 IRF3Q14653 427 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 LY6G6FQ5SQ64 297 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 TMEM65Q6PI78 240 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 TRAT1Q6PIZ9 186 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 SPARTQ8N0X7 666 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 NPBQ8NG41 125 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 DCUN1D4Q92564 292 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 TMEM203Q969S6 136 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 DGCR14Q96DF8 476 aaKnown RBP6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 MRPS24Q96EL2 167 aaKnown RBP6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 LYSTQ99698 3801 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 RBM38Q9H0Z9 239 aaKnown RBP6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 OR51J1Q9H342 316 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 GNB4Q9HAV0 340 aa6.54□□□□□ -1.36
APOBEC3F-204ENST00000491387 TPSG1Q9NRR2 321 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms