RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RPS25P62851 125 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 FABP5Q01469 135 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 INSL4Q14641 139 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 MORN2Q502X0 79 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 UTF1Q5T230 341 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 ZNF329Q86UD4 541 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 STPG2Q8N412 459 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 SETD6Q8TBK2 473 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 YPEL2Q96QA6 119 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 S1PR3Q99500 378 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 ZNF251Q9BRH9 671 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 CHCHD6Q9BRQ6 235 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 KIAA1456Q9P272 454 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 V9GY05 133 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 IGLL1P15814 213 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 BLVRBP30043 206 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 MYCNOSP40205 109 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 MAP2K4P45985 399 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 ZNF137PP52743 207 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 RPL23AP62750 156 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 DCTN2Q13561 401 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 CT45A1Q5HYN5 189 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 LY6G6FQ5SQ64 297 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 CT45A3Q8NHU0 189 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 IL1F10Q8WWZ1 152 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 ST6GALNAC6Q969X2 333 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 PHF21AQ96BD5 680 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 PIPOXQ9P0Z9 390 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 HSF4Q9ULV5 492 aa13.12□□□□□ -0.31
PDLIM2-217ENST00000491330 HSPA12AO43301 675 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 CHATP28329 748 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 FGF9P31371 208 aaPredicted RBP13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 GPR12P47775 334 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 QRFPP83859 136 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 MMDQ15546 238 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 RAB11BQ15907 218 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 KCTD21Q4G0X4 260 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 SIGIRRQ6IA17 410 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 TMEM65Q6PI78 240 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 ZNF695Q8IW36 515 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 SPARTQ8N0X7 666 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 FAM89BQ8N5H3 189 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 NOL4LQ96MY1 436 aaPredicted RBP13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 FAAP24Q9BTP7 215 aa13.11□□□□□ -0.31
PDLIM2-217ENST00000491330 ELANEP08246 267 aa13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 SSX1Q16384 188 aa13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 TCTEX1D4Q5JR98 221 aa13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 ZNF773Q6PK81 442 aa13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 KLHL30-AS1Q8NEE0 82 aa13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 OR52L2PQ8NGH6 319 aa13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 OR56B1Q8NGI3 324 aa13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 MRPL30Q8TCC3 161 aaKnown RBP13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 EDARADDQ8WWZ3 215 aa13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 PTX4Q96A99 478 aa13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 CENPOQ9BU64 300 aa13.1□□□□□ -0.31
PDLIM2-217ENST00000491330 TRBV6-6A0A0A6YYG2 114 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 RAB29O14966 203 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 TMEM127O75204 238 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 ZBTB25P24278 435 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 MC5RP33032 325 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 PPP1CCP36873 323 aaKnown RBP13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 UNC119Q13432 240 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 LSAMPQ13449 338 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 ARL6IP1Q15041 203 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 FOXB2Q5VYV0 432 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 FAM71F2Q6NXP2 309 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 C6orf201Q7Z4U5 140 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 TPRA1Q86W33 373 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 Q8N9W7 124 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 ZNF439Q8NDP4 499 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 ZNF107Q9UII5 783 aaPredicted RBP13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 LINC00527Q9UJ94 153 aa13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 AK6Q9Y3D8 172 aaKnown RBP13.09□□□□□ -0.31
PDLIM2-217ENST00000491330 TRRAPQ9Y4A5 3859 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 SLC31A2O15432 143 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 RAB3BP20337 219 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 RAB6AP20340 208 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 ZNF134P52741 427 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 FOXE3Q13461 319 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 PLGLAQ15195 96 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 P2RY14Q15391 338 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 DEFB121Q5J5C9 76 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 OR10K2Q6IF99 312 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 Q8N6K4 173 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 OR8U1Q8NH10 309 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 FAM3DQ96BQ1 224 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 SULT4A1Q9BR01 284 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 LPAR5Q9H1C0 372 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 RAB22AQ9UL26 194 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 STUB1Q9UNE7 303 aa13.08□□□□□ -0.32
PDLIM2-217ENST00000491330 NOTCH1P46531 2555 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 NAPSAO96009 420 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 PRB2P02812 416 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 GSTP1P09211 210 aaKnown RBP13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 GADD45AP24522 165 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 PSMB9P28065 219 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 CD40LGP29965 261 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 THBS3P49746 956 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 RAB25P57735 213 aa13.07□□□□□ -0.32
PDLIM2-217ENST00000491330 ACTBP60709 375 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1108.8 ms