RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 K7ENP7 123 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 UPK3AO75631 287 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 ALOX5APP20292 161 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 CNN1P51911 297 aaKnown RBP8.4□□□□□ -1.07
NOD1-208ENST00000489614 RANP62826 216 aaKnown RBP8.4□□□□□ -1.07
NOD1-208ENST00000489614 SUPT4H1P63272 117 aaKnown RBP8.4□□□□□ -1.07
NOD1-208ENST00000489614 ROM1Q03395 351 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 FOXC1Q12948 553 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 HSPB2Q16082 182 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 SNAI3Q3KNW1 292 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 KRTAP27-1Q3LI81 207 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 RAET1LQ5VY80 246 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 OR4A47Q6IF82 309 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 INO80CQ6PI98 192 aaPredicted RBP8.4□□□□□ -1.07
NOD1-208ENST00000489614 SPSB3Q6PJ21 355 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 LRRC69Q6ZNQ3 347 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 FAM220AQ7Z4H9 259 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 SPACA3Q8IXA5 215 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 C20orf196Q8IYI0 205 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 H1FOOQ8IZA3 346 aaPredicted RBP8.4□□□□□ -1.07
NOD1-208ENST00000489614 OR6N2Q8NGY6 317 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 NABP1Q96AH0 204 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 ZC2HC1AQ96GY0 325 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 WDYHV1Q96HA8 205 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 HSPB9Q9BQS6 159 aa8.4□□□□□ -1.07
NOD1-208ENST00000489614 ACACBO00763 2458 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 GRIFINA4D1Z8 144 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 E5RGE8 158 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 C11orf98E9PRG8 122 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 H7C1C5 153 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 GLI4P10075 376 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 GNB3P16520 340 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 OMGP23515 440 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 GDF1P27539 372 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 PDLIM4P50479 330 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 LCN6P62502 163 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 SCGB2A2Q13296 93 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 ZNF324BQ6AW86 544 aaPredicted RBP8.39□□□□□ -1.07
NOD1-208ENST00000489614 RBMXL3Q8N7X1 1067 aaKnown RBP8.39□□□□□ -1.07
NOD1-208ENST00000489614 OR2D3Q8NGH3 330 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 SLC25A44Q96H78 314 aaPredicted RBP8.39□□□□□ -1.07
NOD1-208ENST00000489614 ZNF107Q9UII5 783 aaPredicted RBP8.39□□□□□ -1.07
NOD1-208ENST00000489614 ST3GAL6Q9Y274 331 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 SLC5A6Q9Y289 635 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 SDCBPO00560 298 aaPredicted RBP8.39□□□□□ -1.07
NOD1-208ENST00000489614 RENP00797 406 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 GCH1P30793 250 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 DEFB109BQ30KR1 87 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 C16orf82Q7Z2V1 217 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.39□□□□□ -1.07
NOD1-208ENST00000489614 TMEM178AQ8NBL3 297 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 STXBP6Q8NFX7 210 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 OR10D3Q8NH80 312 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 TMEM170AQ8WVE7 144 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 MED29Q9NX70 200 aa8.39□□□□□ -1.07
NOD1-208ENST00000489614 SERPINE3A8MV23 424 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 K7N7A8 449 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 SLC17A2O00624 439 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 TNFSF4P23510 183 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 P2RY1P47900 373 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 POU3F1Q03052 451 aaPredicted RBP8.38□□□□□ -1.07
NOD1-208ENST00000489614 SPATA45Q537H7 98 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 TMEM41BQ5BJD5 291 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 TEX43Q6ZNM6 134 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 UEVLDQ8IX04 471 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 FAM89BQ8N5H3 189 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 OTOSQ8NHW6 89 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 FAM103A1Q9BTL3 118 aaKnown RBP8.38□□□□□ -1.07
NOD1-208ENST00000489614 WDR76Q9H967 626 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 PNRC2Q9NPJ4 139 aaKnown RBP8.38□□□□□ -1.07
NOD1-208ENST00000489614 B4GALT7Q9UBV7 327 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 NBASA2RRP1 2371 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 B4DEV8 164 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 MMP23AO75900 390 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 SFTPDP35247 375 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 GALR1P47211 349 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 TAS2R31P59538 309 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 KRTDAPP60985 99 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 SPOCK1Q08629 439 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 MYPOPQ86VE0 399 aaPredicted RBP8.38□□□□□ -1.07
NOD1-208ENST00000489614 BET1LQ9NYM9 111 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 MRM2Q9UI43 246 aaKnown RBP8.38□□□□□ -1.07
NOD1-208ENST00000489614 MED12LQ86YW9 2145 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 ZZEF1O43149 2961 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 TRAV30A0A087WSZ9 112 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 LILRA1O75019 489 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 DEDDO75618 318 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 CCL11P51671 97 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 FMODQ06828 376 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 OR5B12Q96R08 314 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 AMELYQ99218 206 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 ATP5SQ99766 215 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 EHFQ9NZC4 300 aa8.38□□□□□ -1.07
NOD1-208ENST00000489614 ANKRD11Q6UB99 2663 aaPredicted RBP8.38□□□□□ -1.07
NOD1-208ENST00000489614 NCOA6Q14686 2063 aaPredicted RBP8.37□□□□□ -1.07
NOD1-208ENST00000489614 DOCK7Q96N67 2140 aa8.37□□□□□ -1.07
NOD1-208ENST00000489614 K7EM74 188 aa8.37□□□□□ -1.07
NOD1-208ENST00000489614 WDR1O75083 606 aa8.37□□□□□ -1.07
NOD1-208ENST00000489614 HSPB1P04792 205 aaKnown RBP8.37□□□□□ -1.07
NOD1-208ENST00000489614 SUMO1P63165 101 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms