RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 IGHV1-18A0A0C4DH31 117 aa12.58□□□□□ -0.39
COL9A1-208ENST00000489611 H7C2Y5 167 aa12.58□□□□□ -0.39
COL9A1-208ENST00000489611 NUPL2O15504 423 aaKnown RBP12.58□□□□□ -0.39
COL9A1-208ENST00000489611 TXNL1O43396 289 aa12.58□□□□□ -0.39
COL9A1-208ENST00000489611 SYNGR2O43760 224 aa12.58□□□□□ -0.39
COL9A1-208ENST00000489611 PTBP3O95758 552 aaKnown RBP12.58□□□□□ -0.39
COL9A1-208ENST00000489611 PAX6P26367 422 aa12.58□□□□□ -0.39
COL9A1-208ENST00000489611 ATP6V0CP27449 155 aa12.58□□□□□ -0.39
COL9A1-208ENST00000489611 TIMP3P35625 211 aa12.58□□□□□ -0.39
COL9A1-208ENST00000489611 CLINT1Q14677 625 aa12.58□□□□□ -0.39
COL9A1-208ENST00000489611 DRAM1Q8N682 238 aa12.58□□□□□ -0.39
COL9A1-208ENST00000489611 UNKLQ9H9P5 680 aaKnown RBP12.58□□□□□ -0.39
COL9A1-208ENST00000489611 KIAA1324LA8MWY0 1029 aaPredicted RBP12.58□□□□□ -0.4
COL9A1-208ENST00000489611 PSPNO60542 156 aa12.58□□□□□ -0.4
COL9A1-208ENST00000489611 IFNA5P01569 189 aa12.58□□□□□ -0.4
COL9A1-208ENST00000489611 DYNLT3P51808 116 aa12.58□□□□□ -0.4
COL9A1-208ENST00000489611 HBG1P69891 147 aa12.58□□□□□ -0.4
COL9A1-208ENST00000489611 HBG2P69892 147 aa12.58□□□□□ -0.4
COL9A1-208ENST00000489611 TLE4Q04727 773 aa12.58□□□□□ -0.4
COL9A1-208ENST00000489611 PPP1R35Q8TAP8 253 aa12.58□□□□□ -0.4
COL9A1-208ENST00000489611 SH3BGRL3Q9H299 93 aa12.58□□□□□ -0.4
COL9A1-208ENST00000489611 PPP1R3CQ9UQK1 317 aa12.58□□□□□ -0.4
COL9A1-208ENST00000489611 MMP24Q9Y5R2 645 aa12.58□□□□□ -0.4
COL9A1-208ENST00000489611 AGPAT2O15120 278 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 SIGLEC5O15389 551 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 HBE1P02100 147 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 ADH4P08319 380 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 FABP6P51161 128 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 PAX9P55771 341 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 FLI1Q01543 452 aaPredicted RBP12.57□□□□□ -0.4
COL9A1-208ENST00000489611 KRTCAP3Q53RY4 240 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 TMEM182Q6ZP80 229 aaPredicted RBP12.57□□□□□ -0.4
COL9A1-208ENST00000489611 RBMXL3Q8N7X1 1067 aaKnown RBP12.57□□□□□ -0.4
COL9A1-208ENST00000489611 FAM213BQ8TBF2 198 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 TMEM171Q8WVE6 324 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 GPHA2Q96T91 129 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 PARD6GQ9BYG4 376 aaPredicted RBP12.57□□□□□ -0.4
COL9A1-208ENST00000489611 EIF5A2Q9GZV4 153 aaKnown RBP12.57□□□□□ -0.4
COL9A1-208ENST00000489611 MGAQ8IWI9 3026 aa12.57□□□□□ -0.4
COL9A1-208ENST00000489611 URB1O60287 2271 aaKnown RBP12.57□□□□□ -0.4
COL9A1-208ENST00000489611 C12orf77C9JDV5 145 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 MKRN2OSH3BPM6 223 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 SCAF4O95104 1147 aaKnown RBP12.56□□□□□ -0.4
COL9A1-208ENST00000489611 TMEM50AO95807 157 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 OR8U8P0C7N1 319 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 CTRB1P17538 263 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 OMGP23515 440 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 HTD2P86397 168 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 TBR1Q16650 682 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 ZNF585BQ52M93 769 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 CTRB2Q6GPI1 263 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 Q6ZR03 302 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 ABHD17AQ96GS6 310 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 AIFM2Q9BRQ8 373 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 SLC35B3Q9H1N7 401 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 OPN3Q9H1Y3 402 aaPredicted RBP12.56□□□□□ -0.4
COL9A1-208ENST00000489611 CACNG5Q9UF02 275 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 SPENQ96T58 3664 aaKnown RBP12.56□□□□□ -0.4
COL9A1-208ENST00000489611 ACACAQ13085 2346 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 SPINT2O43291 252 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 LY86O95711 162 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 IGKV1-39P01597 117 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 IGHV3-13P01766 116 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 HBZP02008 142 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 IGKV1D-39P04432 117 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 GZMHP20718 246 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 EPHA1P21709 976 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 GABRA2P47869 451 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 OR3A1P47881 315 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 RPS23P62266 143 aaKnown RBP12.56□□□□□ -0.4
COL9A1-208ENST00000489611 AKR1C8PQ5T2L2 129 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 ZNF66Q6ZN08 573 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 MUCL1Q96DR8 90 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 RBMXL1Q96E39 390 aaKnown RBP12.56□□□□□ -0.4
COL9A1-208ENST00000489611 SFXN3Q9BWM7 321 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 RAB9BQ9NP90 201 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 SMCO4Q9NRQ5 59 aa12.56□□□□□ -0.4
COL9A1-208ENST00000489611 A0A0G2JRQ6 117 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 CST7O76096 145 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 IGKV1-5P01602 117 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 CRYAAP02489 173 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 PPT1P50897 306 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 KRBOX4Q5JUW0 171 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 C1orf185Q5T7R7 199 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 FGFRL1Q8N441 504 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 CD300LFQ8TDQ1 290 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 EDARADDQ8WWZ3 215 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 PSMG3Q9BT73 122 aaPredicted RBP12.55□□□□□ -0.4
COL9A1-208ENST00000489611 SCRT1Q9BWW7 348 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 KCNJ16Q9NPI9 418 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 KIAA1456Q9P272 454 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 SPTBN4Q9H254 2564 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 CEP295Q9C0D2 2601 aa12.55□□□□□ -0.4
COL9A1-208ENST00000489611 SRRM5B3KS81 715 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 GLRXP35754 106 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 NPBWR1P48145 328 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 AESQ08117 197 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 SMUG1Q53HV7 270 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 ZNF826PQ6ZT77 177 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms