RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 NBR2O15453 112 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 CRTAPO75718 401 aaPredicted RBP9.61□□□□□ -0.87
CPSF3-204ENST00000489403 NDUFA3O95167 84 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 MAS1P04201 325 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 GLAP06280 429 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 FUT3P21217 361 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 BLVRBP30043 206 aaPredicted RBP9.61□□□□□ -0.87
CPSF3-204ENST00000489403 RAB9AP51151 201 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 NDPQ00604 133 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 C5orf64Q2M2E5 130 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 C6orf141Q5SZD1 244 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 SBSPONQ8IVN8 264 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 MRPL30Q8TCC3 161 aaKnown RBP9.61□□□□□ -0.87
CPSF3-204ENST00000489403 ALX4Q9H161 411 aaPredicted RBP9.61□□□□□ -0.87
CPSF3-204ENST00000489403 SMPD3Q9NY59 655 aaPredicted RBP9.61□□□□□ -0.87
CPSF3-204ENST00000489403 SAA2-SAA4A0A096LPE2 208 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 PNMA8CA0A1B0GUJ8 204 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 OVOL1O14753 267 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 YPEL1O60688 119 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 PDCD6O75340 191 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 SAA2P0DJI9 122 aaPredicted RBP9.6□□□□□ -0.87
CPSF3-204ENST00000489403 OR3A3P47888 321 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 HTD2P86397 168 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 C19orf54Q5BKX5 351 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 ZNF833PQ6ZTB9 187 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 ZNF554Q86TJ5 538 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 ZNF429Q86V71 674 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 CDH26Q8IXH8 852 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 MINDY2Q8NBR6 621 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 NPBQ8NG41 125 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 DLX4Q92988 240 aaPredicted RBP9.6□□□□□ -0.87
CPSF3-204ENST00000489403 TMEM80Q96HE8 168 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 RCHY1Q96PM5 261 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 DERL3Q96Q80 235 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 YPEL2Q96QA6 119 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 KCNIP1Q9NZI2 227 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 FBXO7Q9Y3I1 522 aa9.6□□□□□ -0.87
CPSF3-204ENST00000489403 DYNC2H1Q8NCM8 4307 aaKnown RBP9.6□□□□□ -0.87
CPSF3-204ENST00000489403 A0A1W2PN81 502 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 SOX15O60248 233 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 SAP30O75446 220 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 CHRNA7P36544 502 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 CAPGP40121 348 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 CRIP2P52943 208 aaPredicted RBP9.59□□□□□ -0.87
CPSF3-204ENST00000489403 SLURP1P55000 103 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 MED21Q13503 144 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 DOC2BQ14184 412 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 ECSCRQ19T08 205 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 LY6G6FQ5SQ64 297 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 CASC10Q5T4H9 136 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 FAM27D1Q5T7N8 215 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 LIN54Q6MZP7 749 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 OVCH2Q7RTZ1 564 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 C10orf67Q8IYJ2 551 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 MUC7Q8TAX7 377 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 FAM46BQ96A09 425 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 LYSTQ99698 3801 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 IFI27L2Q9H2X8 130 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 CHCHD3Q9NX63 227 aaKnown RBP9.59□□□□□ -0.87
CPSF3-204ENST00000489403 KIAA1456Q9P272 454 aa9.59□□□□□ -0.87
CPSF3-204ENST00000489403 SACSQ9NZJ4 4579 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 LINC01619G3V211 115 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 RGS11O94810 467 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 BAG2O95816 211 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 GP9P14770 177 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 SPNP16150 400 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 TAS2R43P59537 309 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 GABPB1Q06547 395 aaPredicted RBP9.58□□□□□ -0.88
CPSF3-204ENST00000489403 HMGN3Q15651 99 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 DMRTA1Q5VZB9 504 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 FAM71F2Q6NXP2 309 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 FAM131AQ6UXB0 335 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 NKAIN3Q8N8D7 197 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 CASTOR1Q8WTX7 329 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 GGHQ92820 318 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 GALMQ96C23 342 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 SULT4A1Q9BR01 284 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 UQCC2Q9BRT2 126 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 TOLLIPQ9H0E2 274 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 CST11Q9H112 138 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 TPSG1Q9NRR2 321 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 SORL1Q92673 2214 aa9.58□□□□□ -0.88
CPSF3-204ENST00000489403 IGHV4OR15-8A0A075B7B6 117 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 A0A087WW49 117 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 ST8SIA5O15466 376 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 LGALS1P09382 135 aaKnown RBP9.57□□□□□ -0.88
CPSF3-204ENST00000489403 FRMD6-AS1P0C7T7 363 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 CX3CL1P78423 397 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 ST3GAL4Q11206 333 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 LRRC36Q1X8D7 754 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 ACSM6Q6P461 480 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 OR2AK2Q8NG84 335 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 CYGBQ8WWM9 190 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 ARPC1AQ92747 370 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 FBXL15Q9H469 300 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 GHRLQ9UBU3 117 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 FOXA2Q9Y261 457 aaPredicted RBP9.57□□□□□ -0.88
CPSF3-204ENST00000489403 STARD9Q9P2P6 4700 aa9.57□□□□□ -0.88
CPSF3-204ENST00000489403 EFCAB10A6NFE3 127 aa9.56□□□□□ -0.88
CPSF3-204ENST00000489403 RRHO14718 337 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms