RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 HOXA3O43365 443 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-224ENST00000488927 HLA-DQB1P01920 261 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 GSTT2P0CG29 244 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 GSTT2BP0CG30 244 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 CEACAM6P40199 344 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 RAB7AP51149 207 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 DYNLT3P51808 116 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 GNMTQ14749 295 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 LRRC75BQ2VPJ9 315 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 TPTE2P1Q5T6R2 138 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 CNIH2Q6PI25 160 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 HOGA1Q86XE5 327 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 LAX1Q8IWV1 398 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 DTX3Q8N9I9 347 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 FAM216AQ8WUB2 273 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 C17orf50Q8WW18 174 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 MAFIPQ8WZ33 124 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 TOLLIPQ9H0E2 274 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 MIXL1Q9H2W2 232 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 IFT46Q9NQC8 304 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 ABCB10Q9NRK6 738 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 ANXA10Q9UJ72 324 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 HILPDAQ9Y5L2 63 aa12.92□□□□□ -0.34
HDAC7-224ENST00000488927 TRBV6-7A0A0A0MS04 114 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 DNAJC9-AS1A6NH13 148 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 TXNL1O43396 289 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 BRS3P32247 399 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 S100A5P33763 92 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 ZNF137PP52743 207 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 SLC9A3R2Q15599 337 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 CT45A1Q5HYN5 189 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 LDLRAD2Q5SZI1 272 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 C5orf24Q7Z6I8 188 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 ZDHHC22Q8N966 263 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 BEST4Q8NFU0 473 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 CT45A3Q8NHU0 189 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 TOMM40LQ969M1 308 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 DIRAS2Q96HU8 199 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 SSX3Q99909 188 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 GINS4Q9BRT9 223 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 BATF3Q9NR55 127 aa12.91□□□□□ -0.34
HDAC7-224ENST00000488927 C2CD3Q4AC94 2353 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 IGKV1-6A0A0C4DH72 117 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 A0A1W2PPE3 182 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 BET1O15155 118 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 VENTXO95231 258 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 RNASE1P07998 156 aaKnown RBP12.9□□□□□ -0.34
HDAC7-224ENST00000488927 PTHLHP12272 177 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 ZNF134P52741 427 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 ARPC4P59998 168 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 UBA52P62987 128 aaKnown RBP12.9□□□□□ -0.34
HDAC7-224ENST00000488927 MRPS10P82664 201 aaKnown RBP12.9□□□□□ -0.34
HDAC7-224ENST00000488927 HERPUD1Q15011 391 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 IGSF11Q5DX21 431 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 SNX29P2Q8IUI4 249 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 OR8H3Q8N146 312 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 ESM1Q9NQ30 184 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 RDH8Q9NYR8 311 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 PIPOXQ9P0Z9 390 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 OR1A1Q9P1Q5 309 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 CUBNO60494 3623 aa12.9□□□□□ -0.34
HDAC7-224ENST00000488927 IGKV1D-8A0A087WSZ0 117 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 HSD17B6O14756 317 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 SLC31A2O15432 143 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 IGHV4-59P01825 116 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 GAPDHP04406 335 aaKnown RBP12.89□□□□□ -0.35
HDAC7-224ENST00000488927 RPL15P61313 204 aaKnown RBP12.89□□□□□ -0.35
HDAC7-224ENST00000488927 ZNF816Q0VGE8 651 aaPredicted RBP12.89□□□□□ -0.35
HDAC7-224ENST00000488927 FOXB2Q5VYV0 432 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 PYHIN1Q6K0P9 492 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 FAM53AQ6NSI3 398 aaPredicted RBP12.89□□□□□ -0.35
HDAC7-224ENST00000488927 FAM71F2Q6NXP2 309 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 LIAT1Q6ZQX7 453 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 LYG1Q8N1E2 194 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 DYNAPQ8N1N2 210 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 GPX8Q8TED1 209 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 PITPNC1Q9UKF7 332 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 ANAPC10Q9UM13 185 aa12.89□□□□□ -0.35
HDAC7-224ENST00000488927 A6NHS1 94 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 H3BUX3 64 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 RAB29O14966 203 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 LANCL1O43813 399 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 NAT1P18440 290 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 TAS2R46P59540 309 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 GVQW1Q8N7I0 195 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 OR5AP2Q8NGF4 316 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 ST6GALNAC6Q969X2 333 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 C11orf54Q9H0W9 315 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-224ENST00000488927 RAB18Q9NP72 206 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 NECAP2Q9NVZ3 263 aa12.88□□□□□ -0.35
HDAC7-224ENST00000488927 TNFSF8P32971 234 aa12.87□□□□□ -0.35
HDAC7-224ENST00000488927 RCVRNP35243 200 aa12.87□□□□□ -0.35
HDAC7-224ENST00000488927 ACTBP60709 375 aa12.87□□□□□ -0.35
HDAC7-224ENST00000488927 ACTG1P63261 375 aa12.87□□□□□ -0.35
HDAC7-224ENST00000488927 IL18Q14116 193 aa12.87□□□□□ -0.35
HDAC7-224ENST00000488927 PLA1AQ53H76 456 aa12.87□□□□□ -0.35
HDAC7-224ENST00000488927 C16orf87Q6PH81 154 aa12.87□□□□□ -0.35
HDAC7-224ENST00000488927 TGIF2LXQ8IUE1 241 aa12.87□□□□□ -0.35
HDAC7-224ENST00000488927 H1FOOQ8IZA3 346 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms