RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 OPTCQ9UBM4 332 aa2.28□□□□□ -2.04
SSR1-209ENST00000488834 DHCR7Q9UBM7 475 aaKnown RBP2.28□□□□□ -2.04
SSR1-209ENST00000488834 OPN4Q9UHM6 478 aa2.28□□□□□ -2.04
SSR1-209ENST00000488834 SMPXQ9UHP9 88 aa2.28□□□□□ -2.04
SSR1-209ENST00000488834 ZNF835Q9Y2P0 537 aa2.28□□□□□ -2.04
SSR1-209ENST00000488834 KLF12Q9Y4X4 402 aa2.28□□□□□ -2.04
SSR1-209ENST00000488834 YTHDF2Q9Y5A9 579 aaKnown RBP2.28□□□□□ -2.04
SSR1-209ENST00000488834 F11RQ9Y624 299 aaKnown RBP2.28□□□□□ -2.04
SSR1-209ENST00000488834 MRPS18BQ9Y676 258 aaKnown RBP2.28□□□□□ -2.04
SSR1-209ENST00000488834 ANKRD31Q8N7Z5 1873 aa2.28□□□□□ -2.04
SSR1-209ENST00000488834 RGPD8O14715 1765 aaPredicted RBP2.28□□□□□ -2.04
SSR1-209ENST00000488834 RGPD5Q99666 1765 aa2.28□□□□□ -2.04
SSR1-209ENST00000488834 NWD1Q149M9 1564 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 BICRAQ9NZM4 1560 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 EDC4Q6P2E9 1401 aaKnown RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 BAZ2AQ9UIF9 1905 aaKnown RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 DOCK1Q14185 1865 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 DOCK5Q9H7D0 1870 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 A0A1W2PP18 115 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 A0A1W2PQL4 384 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 PLAC8L1A1L4L8 177 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 CLDN24A6NM45 220 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 A8MWP6 167 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 FTCDNL1E5RQL4 147 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 F5H5T6 163 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 M0R036 132 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 CDIPTO14735 213 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 MYL12BO14950 172 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 FGF16O43320 207 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 TGOLN2O43493 480 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 CDC40O60508 579 aaKnown RBP eCLIP2.27□□□□□ -2.05
SSR1-209ENST00000488834 SLC25A14O95258 325 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 MPC2O95563 127 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 RAB36O95755 333 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 CYB5R3P00387 301 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 IFNA17P01571 189 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 IGLV2-23P01705 113 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 APOC3P02656 99 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 C8GP07360 202 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 HTR1AP08908 422 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 ZNF286BP0CG31 522 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 LIMS3P0CW19 117 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 LIMS4P0CW20 117 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 SCGB1A1P11684 91 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 GABRA1P14867 456 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 NELFEP18615 380 aaKnown RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 MYL12AP19105 171 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 RAB5AP20339 215 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 PVALBP20472 110 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 RPS3P23396 243 aaKnown RBP eCLIP2.27□□□□□ -2.052e-20■■□□□ 12.7
SSR1-209ENST00000488834 OMGP23515 440 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 NPY1RP25929 384 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 RPA3P35244 121 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 ARL2P36404 184 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 RAB5CP51148 216 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 FABP6P51161 128 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 UBE2E1P51965 193 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 ARPP19P56211 112 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 KLF3P57682 345 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 RPS20P60866 119 aaKnown RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 ERVS71-1P61550 626 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 RRAS2P62070 204 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 EMX2Q04743 252 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 OR7A5Q15622 319 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 NEDD8Q15843 81 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 LY6EQ16553 131 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 GUK1Q16774 197 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 LGALSLQ3ZCW2 172 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 ABCA11PQ4W5N1 156 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 AKIRIN2Q53H80 203 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 PDZD11Q5EBL8 140 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 GCSAMLQ5JQS6 135 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 FAM74A1Q5RGS3 127 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 C10orf91Q5T1B1 145 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 SYT6Q5T7P8 510 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 N4BP2L1Q5TBK1 243 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 HAGHLQ6PII5 290 aaPredicted RBP2.27□□□□□ -2.05
SSR1-209ENST00000488834 LYPD2Q6UXB3 125 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 CASP12Q6UXS9 341 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 MBOAT2Q6ZWT7 520 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 WDFY1Q8IWB7 410 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 DEFB107AQ8IZN7 70 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 CA13Q8N1Q1 262 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 ZFP41Q8N8Y5 198 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 OR8J3Q8NGG0 315 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 OR5L1Q8NGL2 311 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 OR2A1Q8NGT9 310 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 OR10R2Q8NGX6 335 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 OR2T4Q8NH00 348 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 OR5J2Q8NH18 312 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 OR2AE1Q8NHA4 323 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 C16orf78Q8WTQ4 265 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 APH1BQ8WW43 257 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 CYGBQ8WWM9 190 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 TMEM234Q8WY98 164 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 HGDQ93099 445 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 PTH2Q96A98 100 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 UBE2E2Q96LR5 201 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 TMEM56Q96MV1 263 aa2.27□□□□□ -2.05
SSR1-209ENST00000488834 TSNAXQ99598 290 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms