RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TRBV6-6A0A0A6YYG2 114 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 NKX2-8O15522 239 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 NXPH2O95156 264 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 CXCL1P09341 107 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 FOLR2P14207 255 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 RAB5AP20339 215 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 PAX6P26367 422 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 MEOX2P50222 304 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 RAB5BP61020 215 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 AESQ08117 197 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 PRAMEF6Q5VXH4 476 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 OR52L2PQ8NGH6 319 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 OR10V1Q8NGI7 309 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 GTF3AQ92664 365 aaKnown RBP10.71□□□□□ -0.7
CLIC4-202ENST00000488683 CABLES2Q9BTV7 478 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 SLC25A31Q9H0C2 315 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 PLK3Q9H4B4 646 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 ZNF665Q9H7R5 613 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 MSL2Q9HCI7 577 aa10.71□□□□□ -0.7
CLIC4-202ENST00000488683 KLF13Q9Y2Y9 288 aaPredicted RBP10.71□□□□□ -0.7
CLIC4-202ENST00000488683 DUXBA0A1W2PPF3 345 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 YIF1AO95070 293 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 OR2C1O95371 312 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 KRASP01116 189 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 CCL11P51671 97 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 ICAM4Q14773 271 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 ZNF585BQ52M93 769 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 PDZD11Q5EBL8 140 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 LINC00596Q86U02 117 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 RIF1Q5UIP0 2472 aaKnown RBP10.7□□□□□ -0.7
CLIC4-202ENST00000488683 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 KLRC4-KLRK1H3BQV0 150 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 J3QT63 122 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 ZNF806P0C7X5 589 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 IGHV1-2P23083 117 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 RPS10P46783 165 aaKnown RBP10.7□□□□□ -0.7
CLIC4-202ENST00000488683 ZNF726P1Q15940 193 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 AKR1C8PQ5T2L2 129 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 SP5Q6BEB4 398 aaPredicted RBP10.7□□□□□ -0.7
CLIC4-202ENST00000488683 OR1J1Q8NGS3 322 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 C5orf30Q96GV9 206 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 ABHD14BQ96IU4 210 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 TRIB1Q96RU8 372 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 PKIBQ9C010 78 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 RIMS4Q9H426 269 aaPredicted RBP10.7□□□□□ -0.7
CLIC4-202ENST00000488683 OPA3Q9H6K4 179 aa10.7□□□□□ -0.7
CLIC4-202ENST00000488683 ARFGEF3Q5TH69 2177 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 TRGV5A0A0B4J1U4 118 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 G6PCP35575 357 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 TAGLN2P37802 199 aaKnown RBP10.69□□□□□ -0.7
CLIC4-202ENST00000488683 SOX8P57073 446 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 RPL23AP62750 156 aaKnown RBP10.69□□□□□ -0.7
CLIC4-202ENST00000488683 PBDC1Q9BVG4 233 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 RPRMQ9NS64 109 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 SMPD2O60906 423 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 SRP19P09132 144 aaKnown RBP10.69□□□□□ -0.7
CLIC4-202ENST00000488683 OR3A1P47881 315 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 FABP6P51161 128 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 PPP1CBP62140 327 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 RPL30P62888 115 aaKnown RBP10.69□□□□□ -0.7
CLIC4-202ENST00000488683 CTAG1AP78358 180 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 DLK1P80370 383 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 PSG7Q13046 419 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 CLEC12BQ2HXU8 276 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 ZNF766Q5HY98 468 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 PLA2G2CQ5R387 149 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 VWA1Q6PCB0 445 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 IL22RA2Q969J5 263 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 FAM234AQ9H0X4 552 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 TMPRSS5Q9H3S3 457 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 OBP2BQ9NPH6 170 aa10.69□□□□□ -0.7
CLIC4-202ENST00000488683 ZFHX2Q9C0A1 2572 aaPredicted RBP10.68□□□□□ -0.7
CLIC4-202ENST00000488683 SCAF4O95104 1147 aaKnown RBP10.68□□□□□ -0.7
CLIC4-202ENST00000488683 ERVFRD-1P60508 538 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 CDPF1Q6NVV7 123 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 ZNF429Q86V71 674 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 DRAM1Q8N682 238 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 LFNGQ8NES3 379 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 ZDHHC16Q969W1 377 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 ATP5SQ99766 215 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 PSENENQ9NZ42 101 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 WSB1Q9Y6I7 421 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 TRBV23-1A0A0A0MS06 115 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 UBE2L5PA0A1B0GUS4 154 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 A0A1B0GW64 132 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 C5orf52A6NGY3 159 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.68□□□□□ -0.7
CLIC4-202ENST00000488683 OR8U8P0C7N1 319 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 WT1P19544 449 aaPredicted RBP10.68□□□□□ -0.7
CLIC4-202ENST00000488683 UBE2KP61086 200 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 ERVK11-1P61568 191 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 RAB11AP62491 216 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 BAXQ07812 192 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 FOXF2Q12947 444 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 ZNF497Q6ZNH5 498 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 MRGPRDQ8TDS7 321 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 GATAD1Q8WUU5 269 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 SSX3Q99909 188 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 IFT22Q9H7X7 185 aa10.68□□□□□ -0.7
CLIC4-202ENST00000488683 CLN8Q9UBY8 286 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms