RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ODF3L1Q8IXM7 274 aa18.19■□□□□ 0.5
CUL4A-209ENST00000488558 SVOPQ8N4V2 548 aa18.19■□□□□ 0.5
CUL4A-209ENST00000488558 MRAPQ8TCY5 172 aa18.19■□□□□ 0.5
CUL4A-209ENST00000488558 NICN1Q9BSH3 213 aa18.19■□□□□ 0.5
CUL4A-209ENST00000488558 FAAP24Q9BTP7 215 aa18.19■□□□□ 0.5
CUL4A-209ENST00000488558 GPR61Q9BZJ8 451 aa18.19■□□□□ 0.5
CUL4A-209ENST00000488558 ABRACLQ9P1F3 81 aa18.19■□□□□ 0.5
CUL4A-209ENST00000488558 LINC01548A6NM66 108 aa18.18■□□□□ 0.5
CUL4A-209ENST00000488558 SLC17A2O00624 439 aa18.18■□□□□ 0.5
CUL4A-209ENST00000488558 RRP9O43818 475 aaKnown RBP18.18■□□□□ 0.5
CUL4A-209ENST00000488558 CPEP16870 476 aa18.18■□□□□ 0.5
CUL4A-209ENST00000488558 CRHBPP24387 322 aa18.18■□□□□ 0.5
CUL4A-209ENST00000488558 ZNF880Q6PDB4 577 aa18.18■□□□□ 0.5
CUL4A-209ENST00000488558 TMEM203Q969S6 136 aa18.18■□□□□ 0.5
CUL4A-209ENST00000488558 RIMS4Q9H426 269 aaPredicted RBP18.18■□□□□ 0.5
CUL4A-209ENST00000488558 HSMCR30P0CW71 290 aa18.17■□□□□ 0.5
CUL4A-209ENST00000488558 HSPA13P48723 471 aa18.17■□□□□ 0.5
CUL4A-209ENST00000488558 RPS25P62851 125 aaKnown RBP18.17■□□□□ 0.5
CUL4A-209ENST00000488558 PNLIPRP3Q17RR3 467 aa18.17■□□□□ 0.5
CUL4A-209ENST00000488558 FAM71F2Q6NXP2 309 aa18.17■□□□□ 0.5
CUL4A-209ENST00000488558 ZNF833PQ6ZTB9 187 aa18.17■□□□□ 0.5
CUL4A-209ENST00000488558 MRPL41Q8IXM3 137 aaKnown RBP18.17■□□□□ 0.5
CUL4A-209ENST00000488558 RNF152Q8N8N0 203 aa18.17■□□□□ 0.5
CUL4A-209ENST00000488558 OR2AK2Q8NG84 335 aa18.17■□□□□ 0.5
CUL4A-209ENST00000488558 GFI1Q99684 422 aa18.17■□□□□ 0.5
CUL4A-209ENST00000488558 URM1Q9BTM9 101 aaKnown RBP18.17■□□□□ 0.5
CUL4A-209ENST00000488558 LPAR5Q9H1C0 372 aa18.17■□□□□ 0.5
CUL4A-209ENST00000488558 KCNK15Q9H427 330 aa18.17■□□□□ 0.5
CUL4A-209ENST00000488558 A0A0A6YYD4 124 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 TRBV6-6A0A0A6YYG2 114 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 NUDT19A8MXV4 375 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 IGF1P05019 195 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 ARSBP15848 533 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 BLVRBP30043 206 aaPredicted RBP18.16■□□□□ 0.5
CUL4A-209ENST00000488558 SOX6P35712 828 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 MYCNOSP40205 109 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 RANBP1P43487 201 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 F2RL1P55085 397 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 FOXE3Q13461 319 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 ZNF695Q8IW36 515 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 FAM89BQ8N5H3 189 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 KLHL30-AS1Q8NEE0 82 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 PLGRKTQ9HBL7 147 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 PLEKHJ1Q9NW61 149 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 STEAP1Q9UHE8 339 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 HSF4Q9ULV5 492 aa18.16■□□□□ 0.5
CUL4A-209ENST00000488558 CFHR3Q02985 330 aa18.15■□□□□ 0.5
CUL4A-209ENST00000488558 TBCEQ15813 527 aaPredicted RBP18.15■□□□□ 0.5
CUL4A-209ENST00000488558 C8orf86Q6ZUL3 223 aa18.15■□□□□ 0.5
CUL4A-209ENST00000488558 C5orf24Q7Z6I8 188 aa18.15■□□□□ 0.5
CUL4A-209ENST00000488558 P2RX4Q99571 388 aa18.15■□□□□ 0.5
CUL4A-209ENST00000488558 MGLLQ99685 303 aa18.15■□□□□ 0.5
CUL4A-209ENST00000488558 NABP2Q9BQ15 211 aa18.15■□□□□ 0.5
CUL4A-209ENST00000488558 HSPB9Q9BQS6 159 aa18.15■□□□□ 0.5
CUL4A-209ENST00000488558 MCRIP2Q9BUT9 160 aaKnown RBP18.15■□□□□ 0.5
CUL4A-209ENST00000488558 MRPL20Q9BYC9 149 aaKnown RBP18.15■□□□□ 0.5
CUL4A-209ENST00000488558 CCDC90BQ9GZT6 254 aa18.15■□□□□ 0.5
CUL4A-209ENST00000488558 IFI27L2Q9H2X8 130 aa18.15■□□□□ 0.5
CUL4A-209ENST00000488558 CHMP1AQ9HD42 196 aaPredicted RBP18.15■□□□□ 0.5
CUL4A-209ENST00000488558 MGAT4AQ9UM21 535 aa18.15■□□□□ 0.5
CUL4A-209ENST00000488558 SAA2-SAA4A0A096LPE2 208 aa18.14■□□□□ 0.49
CUL4A-209ENST00000488558 ELANEP08246 267 aa18.14■□□□□ 0.49
CUL4A-209ENST00000488558 SAA2P0DJI9 122 aaPredicted RBP18.14■□□□□ 0.49
CUL4A-209ENST00000488558 EGFEM1PQ0D2K5 195 aa18.14■□□□□ 0.49
CUL4A-209ENST00000488558 MMDQ15546 238 aa18.14■□□□□ 0.49
CUL4A-209ENST00000488558 CXorf66Q5JRM2 361 aaPredicted RBP18.14■□□□□ 0.49
CUL4A-209ENST00000488558 C18orf65Q6ZTR6 163 aa18.14■□□□□ 0.49
CUL4A-209ENST00000488558 CHCHD6Q9BRQ6 235 aa18.14■□□□□ 0.49
CUL4A-209ENST00000488558 ACOT13Q9NPJ3 140 aa18.14■□□□□ 0.49
CUL4A-209ENST00000488558 FOXI3A8MTJ6 420 aaPredicted RBP18.13■□□□□ 0.49
CUL4A-209ENST00000488558 ITGB1BP1O14713 200 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 IGHG4P01861 327 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 OR5H8P0DN80 308 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 VDAC1P21796 283 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 ACTBP60709 375 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 P2RY14Q15391 338 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 RAB11BQ15907 218 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 IZUMO2Q6UXV1 221 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 IL1F10Q8WWZ1 152 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 GHITMQ9H3K2 345 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 PIPOXQ9P0Z9 390 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 ZNF107Q9UII5 783 aaPredicted RBP18.13■□□□□ 0.49
CUL4A-209ENST00000488558 BLOC1S6Q9UL45 172 aa18.13■□□□□ 0.49
CUL4A-209ENST00000488558 AK6Q9Y3D8 172 aaKnown RBP18.13■□□□□ 0.49
CUL4A-209ENST00000488558 SOCS1O15524 211 aa18.12■□□□□ 0.49
CUL4A-209ENST00000488558 HLA-DRB1P01911 266 aa18.12■□□□□ 0.49
CUL4A-209ENST00000488558 RPLP1P05386 114 aaKnown RBP18.12■□□□□ 0.49
CUL4A-209ENST00000488558 CALRP27797 417 aaKnown RBP18.12■□□□□ 0.49
CUL4A-209ENST00000488558 OR3A3P47888 321 aa18.12■□□□□ 0.49
CUL4A-209ENST00000488558 CDX1P47902 265 aaPredicted RBP18.12■□□□□ 0.49
CUL4A-209ENST00000488558 PSMD7P51665 324 aa18.12■□□□□ 0.49
CUL4A-209ENST00000488558 FABP5Q01469 135 aa18.12■□□□□ 0.49
CUL4A-209ENST00000488558 DPF1Q92782 380 aa18.12■□□□□ 0.49
CUL4A-209ENST00000488558 C12orf4Q9NQ89 552 aa18.12■□□□□ 0.49
CUL4A-209ENST00000488558 SLC23A1Q9UHI7 598 aa18.12■□□□□ 0.49
CUL4A-209ENST00000488558 AK3Q9UIJ7 227 aa18.12■□□□□ 0.49
CUL4A-209ENST00000488558 RAB29O14966 203 aa18.11■□□□□ 0.49
CUL4A-209ENST00000488558 MAP2K4P45985 399 aa18.11■□□□□ 0.49
CUL4A-209ENST00000488558 HLA-DRB3P79483 266 aa18.11■□□□□ 0.49
CUL4A-209ENST00000488558 ZNF367Q7RTV3 350 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms