RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 STEAP3Q658P3 488 aa14.04□□□□□ -0.16
ITGB1-215ENST00000488494 SLC35E3Q7Z769 313 aa14.04□□□□□ -0.16
ITGB1-215ENST00000488494 OR2AK2Q8NG84 335 aa14.04□□□□□ -0.16
ITGB1-215ENST00000488494 FAM3DQ96BQ1 224 aa14.04□□□□□ -0.16
ITGB1-215ENST00000488494 Q9H521 79 aa14.04□□□□□ -0.16
ITGB1-215ENST00000488494 V9GY05 133 aa14.04□□□□□ -0.16
ITGB1-215ENST00000488494 FOXI3A8MTJ6 420 aaPredicted RBP14.03□□□□□ -0.16
ITGB1-215ENST00000488494 YPEL1O60688 119 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 RGS11O94810 467 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 MYL9P24844 172 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 GPR12P47775 334 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 OR10A3P58181 314 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 BEAN1Q3B7T3 259 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 ZNF880Q6PDB4 577 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 FOXRED2Q8IWF2 684 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 FAM89BQ8N5H3 189 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 Q8N9W7 124 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 CHPT1Q8WUD6 406 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 YPEL2Q96QA6 119 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 MRPL20Q9BYC9 149 aaKnown RBP14.03□□□□□ -0.16
ITGB1-215ENST00000488494 IFI27L2Q9H2X8 130 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 C12orf4Q9NQ89 552 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 LIN7CQ9NUP9 197 aaKnown RBP14.03□□□□□ -0.16
ITGB1-215ENST00000488494 STEAP1Q9UHE8 339 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 LINC00527Q9UJ94 153 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 LRRC42Q9Y546 428 aa14.03□□□□□ -0.16
ITGB1-215ENST00000488494 SAA2-SAA4A0A096LPE2 208 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 SHISA3A0PJX4 238 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 IGHG2P01859 326 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 SAA2P0DJI9 122 aaPredicted RBP14.02□□□□□ -0.17
ITGB1-215ENST00000488494 OR3A3P47888 321 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 VEGFCP49767 419 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 HLA-DRB3P79483 266 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 PLA2G7Q13093 441 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 CD200R1LQ6Q8B3 271 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 ODF3L1Q8IXM7 274 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 ARHGAP5-AS1Q96IT6 56 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 S1PR3Q99500 378 aa14.02□□□□□ -0.17
ITGB1-215ENST00000488494 TRBV6-6A0A0A6YYG2 114 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 TRAV1-2A0A0B4J238 106 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 TMEM272A0A1B0GTI8 110 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 PDCD5O14737 125 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 LDLRAD4O15165 306 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 ST8SIA5O15466 376 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 MRPS14O60783 128 aaKnown RBP14.01□□□□□ -0.17
ITGB1-215ENST00000488494 PF4P02776 101 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 PSMB9P28065 219 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 PSMD7P51665 324 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 C2orf76Q3KRA6 126 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 KPRPQ5T749 579 aaPredicted RBP14.01□□□□□ -0.17
ITGB1-215ENST00000488494 UBE2UQ5VVX9 321 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 ZNF833PQ6ZTB9 187 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 STPG2Q8N412 459 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 FAM71E2Q8N5Q1 922 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 OR8H1Q8NGG4 311 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 OR56B1Q8NGI3 324 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 PECRQ9BY49 303 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 PARP12Q9H0J9 701 aaKnown RBP14.01□□□□□ -0.17
ITGB1-215ENST00000488494 ABCG5Q9H222 651 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 RIMS4Q9H426 269 aaPredicted RBP14.01□□□□□ -0.17
ITGB1-215ENST00000488494 PLSCR3Q9NRY6 295 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 HSF4Q9ULV5 492 aa14.01□□□□□ -0.17
ITGB1-215ENST00000488494 PLXNB1O43157 2135 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 TRDV1A0A1B0GX56 115 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 LINC01548A6NM66 108 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 AP4M1O00189 453 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 DENRO43583 198 aaKnown RBP14□□□□□ -0.17
ITGB1-215ENST00000488494 F2RL1P55085 397 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 SLC35B1P78383 322 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 MMDQ15546 238 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 OXLD1Q5BKU9 147 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 LY6G6FQ5SQ64 297 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 C22orf42Q6IC83 251 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 SPARTQ8N0X7 666 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 RASL11BQ9BPW5 248 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 NABP2Q9BQ15 211 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 OR1A1Q9P1Q5 309 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 SLC23A1Q9UHI7 598 aa14□□□□□ -0.17
ITGB1-215ENST00000488494 A0A0B4J203 849 aa13.99□□□□□ -0.17
ITGB1-215ENST00000488494 SMIM30A4D0T7 59 aa13.99□□□□□ -0.17
ITGB1-215ENST00000488494 IFITM5A6NNB3 132 aa13.99□□□□□ -0.17
ITGB1-215ENST00000488494 CD33P20138 364 aa13.99□□□□□ -0.17
ITGB1-215ENST00000488494 RANBP1P43487 201 aa13.99□□□□□ -0.17
ITGB1-215ENST00000488494 TMEM50BP56557 158 aa13.99□□□□□ -0.17
ITGB1-215ENST00000488494 PLAC9Q5JTB6 97 aa13.99□□□□□ -0.17
ITGB1-215ENST00000488494 CMSS1Q9BQ75 279 aaKnown RBP13.99□□□□□ -0.17
ITGB1-215ENST00000488494 HSPB9Q9BQS6 159 aa13.99□□□□□ -0.17
ITGB1-215ENST00000488494 PRB2P02812 416 aaPredicted RBP13.98□□□□□ -0.17
ITGB1-215ENST00000488494 SLC2A2P11168 524 aaPredicted RBP13.98□□□□□ -0.17
ITGB1-215ENST00000488494 RAB3BP20337 219 aa13.98□□□□□ -0.17
ITGB1-215ENST00000488494 GALP22466 123 aa13.98□□□□□ -0.17
ITGB1-215ENST00000488494 RPL23AP62750 156 aaKnown RBP13.98□□□□□ -0.17
ITGB1-215ENST00000488494 MOGAT2Q3SYC2 334 aa13.98□□□□□ -0.17
ITGB1-215ENST00000488494 RPL39P5Q59GN2 51 aa13.98□□□□□ -0.17
ITGB1-215ENST00000488494 FAM71F2Q6NXP2 309 aa13.98□□□□□ -0.17
ITGB1-215ENST00000488494 NR2C2APQ86WQ0 139 aa13.98□□□□□ -0.17
ITGB1-215ENST00000488494 FCGR1BQ92637 280 aa13.98□□□□□ -0.17
ITGB1-215ENST00000488494 Q9N2K0 584 aa13.98□□□□□ -0.17
ITGB1-215ENST00000488494 RAB22AQ9UL26 194 aa13.98□□□□□ -0.17
ITGB1-215ENST00000488494 MGAT4AQ9UM21 535 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms