RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 YPEL2Q96QA6 119 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 OR51E2Q9H255 320 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 KCNIP1Q9NZI2 227 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 RAB22AQ9UL26 194 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 IGHV3-72A0A0B4J1Y9 119 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 IGKV1D-33P01593 117 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 IGKV1-33P01594 117 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 TFAP2AP05549 437 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 CD28P10747 220 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
COL9A2-208ENST00000488463 MYL9P24844 172 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 RANBP1P43487 201 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 ALDH3B2P48448 385 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 Q6ZTK2 550 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 C5orf56Q8N8D9 126 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 OR56B1Q8NGI3 324 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 EAF1Q96JC9 268 aaPredicted RBP11.28□□□□□ -0.6
COL9A2-208ENST00000488463 PARP12Q9H0J9 701 aaKnown RBP11.28□□□□□ -0.6
COL9A2-208ENST00000488463 RIMS4Q9H426 269 aaPredicted RBP11.28□□□□□ -0.6
COL9A2-208ENST00000488463 RNF167Q9H6Y7 350 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 BATF3Q9NR55 127 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 PLSCR3Q9NRY6 295 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 MOB4Q9Y3A3 225 aa11.28□□□□□ -0.6
COL9A2-208ENST00000488463 IGKV1-6A0A0C4DH72 117 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 SMIM30A4D0T7 59 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 CCDC160A6NGH7 325 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 M0QZK8 103 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 LANCL1O43813 399 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 LPLP06858 475 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 RAB6AP20340 208 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 CD1BP29016 333 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 VDAC2P45880 294 aaPredicted RBP11.27□□□□□ -0.61
COL9A2-208ENST00000488463 TCTEX1D4Q5JR98 221 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 MOB1BQ7L9L4 216 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 OR13F1Q8NGS4 319 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 PTX4Q96A99 478 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 GALMQ96C23 342 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 ZNF251Q9BRH9 671 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 ABHD14AQ9BUJ0 271 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 IFI27L2Q9H2X8 130 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 MMP27Q9H306 513 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 Q9N2K0 584 aa11.27□□□□□ -0.61
COL9A2-208ENST00000488463 NOTOA8MTQ0 251 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 MFNGO00587 321 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 FGF16O43320 207 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 TMEM11P17152 192 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 GADD45AP24522 165 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 IL3RAP26951 378 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 HNF4GQ14541 408 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 ZNF833PQ6ZTB9 187 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 MOB3BQ86TA1 216 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 TPRA1Q86W33 373 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 TGIF2LXQ8IUE1 241 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 OR10R2Q8NGX6 335 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 AGMATQ9BSE5 352 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 C12orf4Q9NQ89 552 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
COL9A2-208ENST00000488463 TXNL1O43396 289 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 AIREO43918 545 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 FBXO24O75426 580 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 SCTP09683 121 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 CLEC2LP0C7M8 214 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 SDC2P34741 201 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 OR3A3P47888 321 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 HLA-DRB3P79483 266 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 CD83Q01151 205 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 LSAMPQ13449 338 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 HES1Q14469 280 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 C2orf68Q2NKX9 166 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 GPR107Q5VW38 600 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 C10orf99Q6UWK7 81 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 LYG1Q8N1E2 194 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 IL1F10Q8WWZ1 152 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 RAB3CQ96E17 227 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 YIPF6Q96EC8 236 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 CITED2Q99967 270 aaPredicted RBP11.25□□□□□ -0.61
COL9A2-208ENST00000488463 CMSS1Q9BQ75 279 aaKnown RBP11.25□□□□□ -0.61
COL9A2-208ENST00000488463 CHCHD6Q9BRQ6 235 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 CENPOQ9BU64 300 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 CHMP1AQ9HD42 196 aaPredicted RBP11.25□□□□□ -0.61
COL9A2-208ENST00000488463 ABRACLQ9P1F3 81 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 OR1A1Q9P1Q5 309 aa11.25□□□□□ -0.61
COL9A2-208ENST00000488463 SAA2-SAA4A0A096LPE2 208 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 LOC100506127A0A0U1RQW1 187 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 SMIM31A0A1B0GVY4 71 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 ITGB1BP1O14713 200 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 PROP1O75360 226 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 SAA2P0DJI9 122 aaPredicted RBP11.24□□□□□ -0.61
COL9A2-208ENST00000488463 HIST1H1DP16402 221 aaKnown RBP11.24□□□□□ -0.61
COL9A2-208ENST00000488463 TMBIM6P55061 237 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 SFXN4Q6P4A7 337 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 ANKRD13BQ86YJ7 626 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 CLVS1Q8IUQ0 354 aaPredicted RBP11.24□□□□□ -0.61
COL9A2-208ENST00000488463 Q8N9W7 124 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 OR5AU1Q8NGC0 362 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 OR2T10Q8NGZ9 312 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 SETD6Q8TBK2 473 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 KCTD7Q96MP8 289 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 NABP2Q9BQ15 211 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 BCL7BQ9BQE9 202 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms