RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ZNF596Q8TC21 504 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 WIPF2Q8TF74 440 aaPredicted RBP4.68□□□□□ -1.66
CDHR3-213ENST00000488386 TOMM40LQ969M1 308 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 RPEQ96AT9 228 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 NOL4LQ96MY1 436 aaPredicted RBP4.68□□□□□ -1.66
CDHR3-213ENST00000488386 DERL3Q96Q80 235 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 S100A13Q99584 98 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 TMED9Q9BVK6 235 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 BARHL1Q9BZE3 327 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 TMEM138Q9NPI0 162 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 PAK1IP1Q9NWT1 392 aaPredicted RBP4.68□□□□□ -1.66
CDHR3-213ENST00000488386 CHCHD3Q9NX63 227 aaKnown RBP4.68□□□□□ -1.66
CDHR3-213ENST00000488386 OR6C3Q9NZP0 311 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 PSORS1C1Q9UIG5 152 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 PITPNC1Q9UKF7 332 aa4.68□□□□□ -1.66
CDHR3-213ENST00000488386 MRPS28Q9Y2Q9 187 aaKnown RBP4.68□□□□□ -1.66
CDHR3-213ENST00000488386 A0A087X0M5 115 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 A0A1B0GX30 115 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 TMEM30CPA0ZSE6 113 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 IRGMA1A4Y4 181 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 EFCAB10A6NFE3 127 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 ERICH4A6NGS2 130 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 NPIPB11E5RHQ5 1161 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 PTGES3LE9PB15 166 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 C15orf65H3BRN8 121 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 AIPO00170 330 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 SDCBPO00560 298 aaPredicted RBP4.67□□□□□ -1.66
CDHR3-213ENST00000488386 HSD17B6O14756 317 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 CASQ2O14958 399 aaPredicted RBP4.67□□□□□ -1.66
CDHR3-213ENST00000488386 CRTAPO75718 401 aaPredicted RBP4.67□□□□□ -1.66
CDHR3-213ENST00000488386 OR2F2O95006 317 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 IGKV1D-33P01593 117 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 IGKV1-33P01594 117 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 IGLL1P15814 213 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 TMEM11P17152 192 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 BRS3P32247 399 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 DYNLT3P51808 116 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 PRRX1P54821 245 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 WNT4P56705 351 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 GABPB1Q06547 395 aaPredicted RBP4.67□□□□□ -1.66
CDHR3-213ENST00000488386 GNMTQ14749 295 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 YIF1BQ5BJH7 314 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 SYT6Q5T7P8 510 aaPredicted RBP4.67□□□□□ -1.66
CDHR3-213ENST00000488386 SIGIRRQ6IA17 410 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 CENPVQ7Z7K6 275 aaPredicted RBP4.67□□□□□ -1.66
CDHR3-213ENST00000488386 MOB3BQ86TA1 216 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 PACRGLQ8N7B6 248 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 NANOGP1Q8N7R0 232 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 ZNF565Q8N9K5 539 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 Q8NFD4 153 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 OR10X1Q8NGY0 326 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 MYDGFQ969H8 173 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 ARL11Q969Q4 196 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 TMEM203Q969S6 136 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 RBM14Q96PK6 669 aaKnown RBP4.67□□□□□ -1.66
CDHR3-213ENST00000488386 MYCBPQ99417 103 aaPredicted RBP4.67□□□□□ -1.66
CDHR3-213ENST00000488386 SELENOIQ9C0D9 397 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 RHOFQ9HBH0 211 aa4.67□□□□□ -1.66
CDHR3-213ENST00000488386 TCRBV4S1A1TA0A5B7 111 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 C12orf77C9JDV5 145 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 MT-ND4P03905 459 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 OPN1MWP04001 364 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 CDK1P06493 297 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 OPN1MW2P0DN77 364 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 OPN1MW3P0DN78 364 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 GTF2F2P13984 249 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 MGMTP16455 207 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 RCC1P18754 421 aaPredicted RBP4.66□□□□□ -1.66
CDHR3-213ENST00000488386 MNDAP41218 407 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 MAP2K4P45985 399 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 RPS25P62851 125 aaKnown RBP4.66□□□□□ -1.66
CDHR3-213ENST00000488386 MED21Q13503 144 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 MED22Q15528 200 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 ACSM3Q53FZ2 586 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 RBM48Q5RL73 367 aaKnown RBP4.66□□□□□ -1.66
CDHR3-213ENST00000488386 C6orf141Q5SZD1 244 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 FAM90A2PQ658T7 463 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 RAB12Q6IQ22 244 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 ZNF497Q6ZNH5 498 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 NDUFA11Q86Y39 141 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 LYPD6Q86Y78 171 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 OR52L2PQ8NGH6 319 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 ABHD5Q8WTS1 349 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 CPNE2Q96FN4 548 aaPredicted RBP4.66□□□□□ -1.66
CDHR3-213ENST00000488386 DUX3Q96PT4 197 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 NICN1Q9BSH3 213 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 FKBP14Q9NWM8 211 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 IL36GQ9NZH8 169 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 CNOT2Q9NZN8 540 aaKnown RBP4.66□□□□□ -1.66
CDHR3-213ENST00000488386 CKLFQ9UBR5 152 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 TRAPPC2LQ9UL33 140 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 LSM2Q9Y333 95 aaKnown RBP4.66□□□□□ -1.66
CDHR3-213ENST00000488386 MOB4Q9Y3A3 225 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 PEX16Q9Y5Y5 336 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 HSPE1-MOB4S4R3N1 261 aa4.66□□□□□ -1.66
CDHR3-213ENST00000488386 A0A0A6YYD4 124 aa4.65□□□□□ -1.67
CDHR3-213ENST00000488386 IGHV1-3A0A0C4DH29 117 aa4.65□□□□□ -1.67
CDHR3-213ENST00000488386 FAM90A18PA6NE21 464 aa4.65□□□□□ -1.67
CDHR3-213ENST00000488386 FAM90A16PA6NEW6 464 aa4.65□□□□□ -1.67
CDHR3-213ENST00000488386 FAM90A20PA6NIJ5 464 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms