RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 FAM216AQ8WUB2 273 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 CORO2AQ92828 525 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 C2orf50Q96LR7 162 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 METTL8Q9H825 291 aaKnown RBP7.82□□□□□ -1.16
SF3B1-211ENST00000487698 CTSZQ9UBR2 303 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 SLC25A10Q9UBX3 287 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-211ENST00000487698 YLPM1P49750 1951 aaKnown RBP7.82□□□□□ -1.16
SF3B1-211ENST00000487698 IGHV3-43A0A0B4J1X8 118 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 RGS13O14921 159 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 TNFSF12O43508 249 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 B3GALNT1O75752 331 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 IGHV3-43DP0DP04 118 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 SLC25A4P12235 298 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 CXCL2P19875 107 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 COL8A2P25067 703 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 MRPS11P82912 194 aaKnown RBP7.81□□□□□ -1.16
SF3B1-211ENST00000487698 EIF4EBP1Q13541 118 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-211ENST00000487698 LYPD2Q6UXB3 125 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF645Q8N7E2 425 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 C5orf30Q96GV9 206 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 AGMATQ9BSE5 352 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 RAB1BQ9H0U4 201 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 KMT2BQ9UMN6 2715 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-211ENST00000487698 FXYD6-FXYD2A0A087WZ82 144 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 TRGV10A0A0A0MS01 117 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 KBTBD11-OT1A0A1B0GTJ5 212 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF729A6NN14 1252 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-211ENST00000487698 A6NNC1 897 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 LYNX1G3V0Z9 82 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 ADAM20O43506 726 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 NDUFA2O43678 99 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 YPEL1O60688 119 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 SNAPC5O75971 98 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 MPC2O95563 127 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 CDS2O95674 445 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 IGHV2-70P01814 119 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 RNF224P0DH78 156 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 LYNX1P0DP58 116 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 S100GP29377 79 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 MEF2CQ06413 473 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-211ENST00000487698 C11orf87Q6NUJ2 197 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 TMEM65Q6PI78 240 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 LYZL2Q7Z4W2 148 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 SLC35G3Q8N808 338 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 ZBTB34Q8NCN2 500 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 YPEL2Q96QA6 119 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 GON7Q9BXV9 100 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 OR2D2Q9H210 308 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 RAB9BQ9NP90 201 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 COMMD9Q9P000 198 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 CLN8Q9UBY8 286 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 KCNS2Q9ULS6 477 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 UBE2J1Q9Y385 318 aaPredicted RBP7.81□□□□□ -1.16
SF3B1-211ENST00000487698 RBM7Q9Y580 266 aaKnown RBP7.81□□□□□ -1.16
SF3B1-211ENST00000487698 LINC00312Q9Y6C7 94 aa7.81□□□□□ -1.16
SF3B1-211ENST00000487698 DUXBA0A1W2PPF3 345 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 hADV38S2A0JD32 116 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 ARPC5O15511 151 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 IFNA21P01568 189 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 RPA2P15927 270 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 PSMB6P28072 239 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 IAH1Q2TAA2 248 aaPredicted RBP7.8□□□□□ -1.16
SF3B1-211ENST00000487698 TMEM30BQ3MIR4 351 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 LRRC37A5PQ49AS3 106 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 MORN2Q502X0 79 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 TMEM268Q5VZI3 342 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 MEX3BQ6ZN04 569 aaKnown RBP7.8□□□□□ -1.16
SF3B1-211ENST00000487698 SELENOHQ8IZQ5 122 aaKnown RBP7.8□□□□□ -1.16
SF3B1-211ENST00000487698 IL22RA2Q969J5 263 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 SLA2Q9H6Q3 261 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 HEXA-AS1Q9H8Q6 139 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 C19orf12Q9NSK7 152 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 TMED3Q9Y3Q3 217 aa7.8□□□□□ -1.16
SF3B1-211ENST00000487698 HAX1O00165 279 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 ITGB1BP1O14713 200 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 NDUFB3O43676 98 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 GOSR1O95249 250 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 LYL1P12980 280 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 NDUFB7P17568 137 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 OMGP23515 440 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 SSTR2P30874 369 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 OR51H1Q8NH63 302 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 NEU4Q8WWR8 484 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-211ENST00000487698 EDARADDQ8WWZ3 215 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 LIN7CQ9NUP9 197 aaKnown RBP7.79□□□□□ -1.16
SF3B1-211ENST00000487698 GFOD1Q9NXC2 390 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 TAS2R3Q9NYW6 316 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 MBD2Q9UBB5 411 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 GNG12Q9UBI6 72 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 RNF150Q9ULK6 438 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 TNFSF18Q9UNG2 199 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 LRRK2Q5S007 2527 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 H0YIZ8 118 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 DVL1O14640 695 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 ST8SIA5O15466 376 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 RPL31P62899 125 aaKnown RBP7.79□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF273Q14593 569 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 LTC4SQ16873 150 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 LRRC10Q5BKY1 277 aa7.79□□□□□ -1.16
SF3B1-211ENST00000487698 NMSQ5H8A3 153 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms