RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 OPN4Q9UHM6 478 aa5.03□□□□□ -1.6
RTFDC1-209ENST00000487211 ING4Q9UNL4 249 aa5.03□□□□□ -1.6
RTFDC1-209ENST00000487211 TENM3Q9P273 2699 aa5.03□□□□□ -1.6
RTFDC1-209ENST00000487211 DOCK11Q5JSL3 2073 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 A0A087WXM4 84 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 PPIAL4CA0A0B4J2A2 164 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 TRDV1A0A1B0GX56 115 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 A0A1W2PS18 150 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 TRIM64CA6NLI5 447 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 CCRL2O00421 344 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 MAGEB3O15480 346 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 NDUFB3O43676 98 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 ZNF737O75373 536 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 TNFAIP8O95379 198 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 PRKACAP17612 351 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 MAPK3P27361 379 aaPredicted RBP5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 NPY4RP50391 375 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 SNU13P55769 128 aaKnown RBP5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 PPP3R1P63098 170 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 TRAM1Q15629 374 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 HSD17B12Q53GQ0 312 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 FAM120AOSQ5T036 256 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 ELP2Q6IA86 826 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 Q6P435 159 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 C17orf107Q6ZR85 190 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 SLC36A1Q7Z2H8 476 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 LY6G5BQ8NDX9 201 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 PXT1Q8NFP0 134 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 TNFAIP8L1Q8WVP5 186 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 FCGR1BQ92637 280 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 EMG1Q92979 244 aaKnown RBP5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 CYYR1Q96J86 154 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 C1orf147Q96MC9 270 aaPredicted RBP5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 GPER1Q99527 375 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 OR51E2Q9H255 320 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 ELL3Q9HB65 397 aaPredicted RBP5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 NEK6Q9HC98 313 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 NDUFB11Q9NX14 153 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 CKLFQ9UBR5 152 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 RNF150Q9ULK6 438 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 GSTK1Q9Y2Q3 226 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 AK6Q9Y3D8 172 aaKnown RBP5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 INSIG2Q9Y5U4 225 aa5.02□□□□□ -1.61
RTFDC1-209ENST00000487211 IGHV2-70DA0A0C4DH43 119 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 RNF212BA8MTL3 300 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 K7N7A8 449 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 SH2D1BO14796 132 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 CRLF1O75462 422 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 OR2H2O95918 312 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 HAND1O96004 215 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 CYB5AP00167 134 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 SMIM18P0DKX4 95 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 PPIAL4GP0DN37 164 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 PSMA1P25786 263 aaKnown RBP5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 CALRP27797 417 aaKnown RBP5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 CAV3P56539 151 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 FGF12P61328 243 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 ARF6P62330 175 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 SCN1BQ07699 218 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 RSU1Q15404 277 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 SMIM21Q3B7S5 101 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 PIGYQ3MUY2 71 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 LRRC10Q5BKY1 277 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 C1orf100Q5SVJ3 147 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 C22orf42Q6IC83 251 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 GLIPR1L1Q6UWM5 242 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 NR2C2APQ86WQ0 139 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 CDH26Q8IXH8 852 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 Q8IYB0 196 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 ZNF561Q8N587 486 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 JAGN1Q8N5M9 183 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 C11orf42Q8N5U0 333 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 NKAIN3Q8N8D7 197 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 TMEM104Q8NE00 496 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 OR4S1Q8NGB4 309 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 OR4M1Q8NGD0 313 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 OR51T1Q8NGJ9 327 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 OR13A1Q8NGR1 328 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 PHYHIPQ92561 330 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 THRSPQ92748 146 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 YIPF6Q96EC8 236 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 DCTN5Q9BTE1 182 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 CHST6Q9GZX3 395 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 METTL9Q9H1A3 318 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 RNF167Q9H6Y7 350 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 RHOFQ9HBH0 211 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 TXNL4BQ9NX01 149 aaKnown RBP5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 IL36GQ9NZH8 169 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 OR5V1Q9UGF6 321 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 RPUSD1Q9UJJ7 312 aaKnown RBP5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 AUP1Q9Y679 476 aa5.01□□□□□ -1.61
RTFDC1-209ENST00000487211 IGLV5-45A0A087WSX0 123 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 TRAV1-2A0A0B4J238 106 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 TRAV24A0A0B4J272 114 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 A0A0G2JMP0 313 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 A0A0X1KG70 313 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 A0A1W2PPI3 338 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 MEX3AA1L020 520 aaKnown RBP5□□□□□ -1.61
RTFDC1-209ENST00000487211 SIRPB1O00241 398 aa5□□□□□ -1.61
RTFDC1-209ENST00000487211 GEMIN2O14893 280 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms