RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 SCAND1P57086 179 aa14.56□□□□□ -0.08
COL1A1-207ENST00000486572 SRSF4Q08170 494 aaKnown RBP14.56□□□□□ -0.08
COL1A1-207ENST00000486572 HABP2Q14520 560 aaPredicted RBP14.56□□□□□ -0.08
COL1A1-207ENST00000486572 LY6G6FQ5SQ64 297 aa14.56□□□□□ -0.08
COL1A1-207ENST00000486572 SGMS2Q8NHU3 365 aa14.56□□□□□ -0.08
COL1A1-207ENST00000486572 CITED1Q99966 193 aa14.56□□□□□ -0.08
COL1A1-207ENST00000486572 A0A075B6Q4 140 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 SCGNO76038 276 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 SMIM18P0DKX4 95 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 KRTAP10-3P60369 221 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 HES1Q14469 280 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 ARL6IP1Q15041 203 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 IDNKQ5T6J7 187 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 MOB3BQ86TA1 216 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 TGIF2LXQ8IUE1 241 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 LYG1Q8N1E2 194 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 OR2AK2Q8NG84 335 aa14.55□□□□□ -0.08
COL1A1-207ENST00000486572 FBN3Q75N90 2809 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 M0QZK8 103 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 TMEM127O75204 238 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 IGKV1D-33P01593 117 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 IGKV1-33P01594 117 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 FCGR3AP08637 254 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 TGFBR1P36897 503 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 LSM3P62310 102 aaKnown RBP14.54□□□□□ -0.08
COL1A1-207ENST00000486572 BLCAPP62952 87 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 ARSJQ5FYB0 599 aaPredicted RBP14.54□□□□□ -0.08
COL1A1-207ENST00000486572 IZUMO1Q8IYV9 350 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 FUNDC2Q9BWH2 189 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 RHBDL2Q9NX52 303 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 SLC23A1Q9UHI7 598 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 MOB4Q9Y3A3 225 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 ETV7Q9Y603 341 aa14.54□□□□□ -0.08
COL1A1-207ENST00000486572 TRDCB7Z8K6 153 aa14.53□□□□□ -0.08
COL1A1-207ENST00000486572 LANCL1O43813 399 aa14.53□□□□□ -0.08
COL1A1-207ENST00000486572 SCTP09683 121 aa14.53□□□□□ -0.08
COL1A1-207ENST00000486572 TMEM11P17152 192 aa14.53□□□□□ -0.08
COL1A1-207ENST00000486572 ZBTB25P24278 435 aa14.53□□□□□ -0.08
COL1A1-207ENST00000486572 ARFRP1Q13795 201 aa14.53□□□□□ -0.08
COL1A1-207ENST00000486572 CROCCP3Q8IVE0 287 aa14.53□□□□□ -0.08
COL1A1-207ENST00000486572 KLHDC1Q8N7A1 406 aa14.53□□□□□ -0.08
COL1A1-207ENST00000486572 OR13F1Q8NGS4 319 aa14.53□□□□□ -0.08
COL1A1-207ENST00000486572 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL1A1-207ENST00000486572 SERTAD4Q9NUC0 356 aa14.53□□□□□ -0.08
COL1A1-207ENST00000486572 IGHV3-72A0A0B4J1Y9 119 aa14.52□□□□□ -0.09
COL1A1-207ENST00000486572 HSPA12AO43301 675 aa14.52□□□□□ -0.09
COL1A1-207ENST00000486572 EBI3Q14213 229 aa14.52□□□□□ -0.09
COL1A1-207ENST00000486572 KIR2DS1Q14954 304 aa14.52□□□□□ -0.09
COL1A1-207ENST00000486572 Q6ZS46 218 aa14.52□□□□□ -0.09
COL1A1-207ENST00000486572 ODF3L1Q8IXM7 274 aa14.52□□□□□ -0.09
COL1A1-207ENST00000486572 IFI27L2Q9H2X8 130 aa14.52□□□□□ -0.09
COL1A1-207ENST00000486572 OR1A1Q9P1Q5 309 aa14.52□□□□□ -0.09
COL1A1-207ENST00000486572 SAA2-SAA4A0A096LPE2 208 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 FABP7O15540 132 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 AMY1AP04745 511 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 AMY2AP04746 511 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 SAA2P0DJI9 122 aaPredicted RBP14.51□□□□□ -0.09
COL1A1-207ENST00000486572 VSIG10L2P0DP72 767 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 CD1BP29016 333 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 TALDO1P37837 337 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 RPS19P39019 145 aaKnown RBP14.51□□□□□ -0.09
COL1A1-207ENST00000486572 VDAC2P45880 294 aaPredicted RBP14.51□□□□□ -0.09
COL1A1-207ENST00000486572 HNF4GQ14541 408 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 CDNFQ49AH0 187 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 ABCA11PQ4W5N1 156 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 OR4A4PQ8NGN8 299 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 OR5H6Q8NGV6 325 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 OR2T10Q8NGZ9 312 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 EDARADDQ8WWZ3 215 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 SLC25A38Q96DW6 304 aa14.51□□□□□ -0.09
COL1A1-207ENST00000486572 MRPS26Q9BYN8 205 aaKnown RBP14.51□□□□□ -0.09
COL1A1-207ENST00000486572 PARP12Q9H0J9 701 aaKnown RBP14.51□□□□□ -0.09
COL1A1-207ENST00000486572 IGKV1-6A0A0C4DH72 117 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 ITGB1BP1O14713 200 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 ST8SIA5O15466 376 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 PEX14O75381 377 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 GSTP1P09211 210 aaKnown RBP14.5□□□□□ -0.09
COL1A1-207ENST00000486572 CEACAM6P40199 344 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 SERPINB10P48595 397 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 HERPUD1Q15011 391 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 PRR31Q5SQ13 230 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 HACD4Q5VWC8 232 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 ZNF833PQ6ZTB9 187 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 PHF21AQ96BD5 680 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 EAF1Q96JC9 268 aaPredicted RBP14.5□□□□□ -0.09
COL1A1-207ENST00000486572 PIPOXQ9P0Z9 390 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 ZNF230Q9UIE0 474 aaPredicted RBP14.5□□□□□ -0.09
COL1A1-207ENST00000486572 ELF5Q9UKW6 265 aaPredicted RBP14.5□□□□□ -0.09
COL1A1-207ENST00000486572 SPATA2Q9UM82 520 aa14.5□□□□□ -0.09
COL1A1-207ENST00000486572 ZNF736B4DX44 427 aaPredicted RBP14.49□□□□□ -0.09
COL1A1-207ENST00000486572 FGF16O43320 207 aa14.49□□□□□ -0.09
COL1A1-207ENST00000486572 MOSP00540 346 aa14.49□□□□□ -0.09
COL1A1-207ENST00000486572 DTYMKP23919 212 aa14.49□□□□□ -0.09
COL1A1-207ENST00000486572 OR3A3P47888 321 aa14.49□□□□□ -0.09
COL1A1-207ENST00000486572 NCS1P62166 190 aa14.49□□□□□ -0.09
COL1A1-207ENST00000486572 LSAMPQ13449 338 aa14.49□□□□□ -0.09
COL1A1-207ENST00000486572 SRSF7Q16629 238 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL1A1-207ENST00000486572 TMEM95Q3KNT9 176 aa14.49□□□□□ -0.09
COL1A1-207ENST00000486572 FAM71F2Q6NXP2 309 aa14.49□□□□□ -0.09
COL1A1-207ENST00000486572 Q8N6K4 173 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms