RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ASPMQ8IZT6 3477 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 USF3Q68DE3 2245 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 BORCS7-ASMTA0A0B4J1R7 106 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 C17orf100A8MU93 164 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 I3L521 148 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 SPRY3O43610 288 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 YPEL1O60688 119 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 SCGB1D2O95969 90 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 OR8U9P0C7N5 309 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 GLIPR1P48060 266 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 BSPH1Q075Z2 132 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 WFDC8Q8IUA0 241 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 OR2C3Q8N628 320 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 OR13A1Q8NGR1 328 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 OR8U1Q8NH10 309 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 MRGPRDQ8TDS7 321 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 YPEL2Q96QA6 119 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 RAB40CQ96S21 281 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 HSD17B10Q99714 261 aaKnown RBP9.98□□□□□ -0.81
PKP4-213ENST00000486254 ESRP2Q9H6T0 727 aaKnown RBP9.98□□□□□ -0.81
PKP4-213ENST00000486254 ZC4H2Q9NQZ6 224 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 LPAR3Q9UBY5 353 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 METRNQ9UJH8 293 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 GAB2Q9UQC2 676 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 RNF115Q9Y4L5 304 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 RBM7Q9Y580 266 aaKnown RBP9.98□□□□□ -0.81
PKP4-213ENST00000486254 IGF2RP11717 2491 aa9.98□□□□□ -0.81
PKP4-213ENST00000486254 TRAV39A0A0B4J263 110 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 SEC11BP0C7V7 166 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 FAM157CP0CG43 387 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 CGB3P0DN86 165 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 CGB7P0DN87 165 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 CHRNB4P30926 498 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 TAS2R30P59541 319 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 ZNF266Q14584 549 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 EFNB3Q15768 340 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 ZNF585BQ52M93 769 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 NCMAPQ5T1S8 102 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 VHLLQ6RSH7 139 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 FOXRED2Q8IWF2 684 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 STPG2Q8N412 459 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 PRR18Q8N4B5 295 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 KDF1Q8NAX2 398 aaPredicted RBP9.97□□□□□ -0.81
PKP4-213ENST00000486254 OR51H1Q8NH63 302 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 CD300LFQ8TDQ1 290 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 ARL11Q969Q4 196 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 SMIM8Q96KF7 97 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 AGMATQ9BSE5 352 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 KCNS2Q9ULS6 477 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 WSB1Q9Y6I7 421 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 DSCAMO60469 2012 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 TANC2Q9HCD6 1990 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 LRRC30A6NM36 301 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 TEX46H3BTG2 121 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 KCNAB3O43448 404 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 TNFSF12O43508 249 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 IGKV1-39P01597 117 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 IGKV1D-39P04432 117 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 OR4A8P0C604 315 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 P0C879 139 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 IRF2P14316 349 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 SULT1A2P50226 295 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 RAB5CP51148 216 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 ARHGDIBP52566 201 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 FAM74A1Q5RGS3 127 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 RPL7L1Q6DKI1 246 aaKnown RBP9.97□□□□□ -0.81
PKP4-213ENST00000486254 ZNF788Q6ZQV5 615 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 C1orf87Q8N0U7 546 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.97□□□□□ -0.81
PKP4-213ENST00000486254 PCNPQ8WW12 178 aaKnown RBP9.97□□□□□ -0.81
PKP4-213ENST00000486254 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 CORO2AQ92828 525 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 GINS3Q9BRX5 216 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 EGLN1Q9GZT9 426 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 PARP12Q9H0J9 701 aaKnown RBP9.97□□□□□ -0.81
PKP4-213ENST00000486254 OR2D2Q9H210 308 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 OR2S2Q9NQN1 319 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 NUP50Q9UKX7 468 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 PPP1R3CQ9UQK1 317 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 MMP24Q9Y5R2 645 aa9.97□□□□□ -0.81
PKP4-213ENST00000486254 PIEZO2Q9H5I5 2752 aa9.96□□□□□ -0.81
PKP4-213ENST00000486254 KIAA1324LA8MWY0 1029 aaPredicted RBP9.96□□□□□ -0.82
PKP4-213ENST00000486254 SIGLEC5O15389 551 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 RBFOX2O43251 390 aaKnown RBP eCLIP9.96□□□□□ -0.82
PKP4-213ENST00000486254 FSTL3O95633 263 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 SSTR5P35346 364 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 RAB7AP51149 207 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 BLOC1S1P78537 153 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 EWSR1Q01844 656 aaKnown RBP eCLIP9.96□□□□□ -0.82
PKP4-213ENST00000486254 ALKBH2Q6NS38 261 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 IL34Q6ZMJ4 242 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 RNASE6Q93091 150 aaKnown RBP9.96□□□□□ -0.82
PKP4-213ENST00000486254 GPR146Q96CH1 333 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 LRRC46Q96FV0 321 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 ZNF665Q9H7R5 613 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 CACFD1Q9UGQ2 172 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 DMXL2Q8TDJ6 3036 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 BOD1L1Q8NFC6 3051 aa9.96□□□□□ -0.82
PKP4-213ENST00000486254 DCHS1Q96JQ0 3298 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 PIEZO1Q92508 2521 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms