RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 MAP1LC3BQ9GZQ8 125 aa19.07■□□□□ 0.64
CLN5-202ENST00000485938 CDH20Q9HBT6 801 aa19.07■□□□□ 0.64
CLN5-202ENST00000485938 DOCK10Q96BY6 2186 aa19.07■□□□□ 0.64
CLN5-202ENST00000485938 PINX1Q96BK5 328 aaKnown RBP19.06■□□□□ 0.64
CLN5-202ENST00000485938 RBKSQ9H477 322 aa19.06■□□□□ 0.64
CLN5-202ENST00000485938 IFNA1P01562 189 aa19.06■□□□□ 0.64
CLN5-202ENST00000485938 DUSP3P51452 185 aaPredicted RBP19.06■□□□□ 0.64
CLN5-202ENST00000485938 PMS2P11Q13670 270 aa19.06■□□□□ 0.64
CLN5-202ENST00000485938 OR1K1Q8NGR3 316 aa19.06■□□□□ 0.64
CLN5-202ENST00000485938 PKIBQ9C010 78 aa19.06■□□□□ 0.64
CLN5-202ENST00000485938 OR51I2Q9H344 312 aa19.06■□□□□ 0.64
CLN5-202ENST00000485938 TMEM9BQ9NQ34 198 aa19.06■□□□□ 0.64
CLN5-202ENST00000485938 LIN7CQ9NUP9 197 aaKnown RBP19.06■□□□□ 0.64
CLN5-202ENST00000485938 ESPL1Q14674 2120 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 LY86O95711 162 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 WNT5AP41221 380 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 ELLP55199 621 aaPredicted RBP19.05■□□□□ 0.64
CLN5-202ENST00000485938 CD81P60033 236 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 GAMTQ14353 236 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 ZNF703Q9H7S9 590 aaPredicted RBP19.05■□□□□ 0.64
CLN5-202ENST00000485938 ZNF16P17020 682 aaPredicted RBP19.05■□□□□ 0.64
CLN5-202ENST00000485938 SPANXN5Q5MJ07 72 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 BEND4Q6ZU67 534 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 MOB1BQ7L9L4 216 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 PRR18Q8N4B5 295 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 TAF15Q92804 592 aaKnown RBP eCLIP19.05■□□□□ 0.64
CLN5-202ENST00000485938 SNX22Q96L94 193 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 STRADBQ9C0K7 418 aa19.05■□□□□ 0.64
CLN5-202ENST00000485938 PATE3B3GLJ2 98 aa19.04■□□□□ 0.64
CLN5-202ENST00000485938 ZNF737O75373 536 aa19.04■□□□□ 0.64
CLN5-202ENST00000485938 IGFBP7Q16270 282 aa19.04■□□□□ 0.64
CLN5-202ENST00000485938 OR2M7Q8NG81 312 aa19.04■□□□□ 0.64
CLN5-202ENST00000485938 HIST1H2BLQ99880 126 aa19.04■□□□□ 0.64
CLN5-202ENST00000485938 AGMATQ9BSE5 352 aa19.04■□□□□ 0.64
CLN5-202ENST00000485938 KCNS2Q9ULS6 477 aa19.04■□□□□ 0.64
CLN5-202ENST00000485938 SYNGR4O95473 234 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 PLP2Q04941 152 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 CLN3Q13286 438 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 FAM180AQ6UWF9 173 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 CT55Q8WUE5 264 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 APH1AQ96BI3 265 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 S100PBPQ96BU1 408 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 NAT8Q9UHE5 227 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 A0A1W2PR80 420 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 J3QT63 122 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 IGKV1D-33P01593 117 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 IGKV1-33P01594 117 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 CA6P23280 308 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 SLC38A11Q08AI6 406 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 SSPNQ14714 243 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 ZNF497Q6ZNH5 498 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 RPP25LQ8N5L8 163 aaKnown RBP19.03■□□□□ 0.64
CLN5-202ENST00000485938 OR10A7Q8NGE5 316 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 LHX4Q969G2 390 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 PACRGQ96M98 296 aaPredicted RBP19.03■□□□□ 0.64
CLN5-202ENST00000485938 SMIM7Q9BQ49 75 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 FAM173AQ9BQD7 235 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 PITPNC1Q9UKF7 332 aa19.03■□□□□ 0.64
CLN5-202ENST00000485938 RBM7Q9Y580 266 aaKnown RBP19.03■□□□□ 0.64
CLN5-202ENST00000485938 UBE2L5PA0A1B0GUS4 154 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 B4E171 279 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 MDKP21741 143 aaPredicted RBP19.02■□□□□ 0.64
CLN5-202ENST00000485938 TSPAN7P41732 249 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 OR4X1Q8NH49 305 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 UBALD1Q8TB05 177 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 RHOVQ96L33 236 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 OR51B6Q9H340 312 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 WDR1O75083 606 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 CD55P08174 381 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 CYP2G1PQ6ZSU1 146 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 TIPARPQ7Z3E1 657 aaKnown RBP19.02■□□□□ 0.64
CLN5-202ENST00000485938 C14orf144Q96I85 54 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 SLC39A9Q9NUM3 307 aa19.02■□□□□ 0.64
CLN5-202ENST00000485938 NEURL1O76050 574 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 PDGFBP01127 241 aaPredicted RBP19.01■□□□□ 0.63
CLN5-202ENST00000485938 PFN1P07737 140 aaKnown RBP19.01■□□□□ 0.63
CLN5-202ENST00000485938 APLNRP35414 380 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 MEF2BQ02080 365 aaPredicted RBP19.01■□□□□ 0.63
CLN5-202ENST00000485938 ADIRFQ15847 76 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 DCAF12Q5T6F0 453 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 NCR3LG1Q68D85 454 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 TMEM14EPQ6UXP3 125 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 DRAM1Q8N682 238 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 SRD5A3Q9H8P0 318 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 TIMM9Q9Y5J7 89 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 KIAA2026Q5HYC2 2103 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 FAM90A26D6RGX4 464 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 SIRPB1O00241 398 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 TMEM241Q24JQ0 296 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 FGFRL1Q8N441 504 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 MAFAQ8NHW3 353 aaPredicted RBP19.01■□□□□ 0.63
CLN5-202ENST00000485938 PYGO2Q9BRQ0 406 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 TRAPPC2LQ9UL33 140 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 WDFY4Q6ZS81 3184 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 KMT2EQ8IZD2 1858 aa19.01■□□□□ 0.63
CLN5-202ENST00000485938 C16orf82Q7Z2V1 217 aa19■□□□□ 0.63
CLN5-202ENST00000485938 CENPVQ7Z7K6 275 aaPredicted RBP19■□□□□ 0.63
CLN5-202ENST00000485938 MED12LQ86YW9 2145 aa19■□□□□ 0.63
CLN5-202ENST00000485938 THOC3Q96J01 351 aaKnown RBP19■□□□□ 0.63
CLN5-202ENST00000485938 HES7Q9BYE0 225 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms