RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 RAB29O14966 203 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 BET1O15155 118 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 TXNL1O43396 289 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 TOX4O94842 621 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 IGLV1-47P01700 117 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 IGHV4-31P0DP07 118 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 MMP9P14780 707 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 CCL3L1P16619 93 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 IL3RAP26951 378 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 CEACAM3P40198 252 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 MECP2P51608 486 aaKnown RBP6.76□□□□□ -1.33
SYNE1-225ENST00000481502 UBE2E1P51965 193 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 HERV-K104P61576 105 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 ARF6P62330 175 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 MADCAM1Q13477 382 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 MIDNQ504T8 468 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 MINOS1Q5TGZ0 78 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 AADACL3Q5VUY0 350 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 IDO2Q6ZQW0 420 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 KCTD9Q7L273 389 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 CMTM1Q8IZ96 169 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 SLC38A6Q8IZM9 456 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 ABHD12Q8N2K0 398 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 FGFRL1Q8N441 504 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 Q8N7P7 452 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 POC5Q8NA72 575 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 ZNF439Q8NDP4 499 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 OR2AK2Q8NG84 335 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 OR10V1Q8NGI7 309 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 OR51S1Q8NGJ8 323 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 RFESDQ8TAC1 157 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 MAFIPQ8WZ33 124 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 UPRTQ96BW1 309 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 MSI2Q96DH6 328 aaKnown RBP6.76□□□□□ -1.33
SYNE1-225ENST00000481502 SLC6A7Q99884 636 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 CLEC7AQ9BXN2 247 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 TINAGL1Q9GZM7 467 aaPredicted RBP6.76□□□□□ -1.33
SYNE1-225ENST00000481502 C11orf54Q9H0W9 315 aaPredicted RBP6.76□□□□□ -1.33
SYNE1-225ENST00000481502 MCUBQ9NWR8 336 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 HIF1ANQ9NWT6 349 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 GPR132Q9UNW8 380 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 TBL2Q9Y4P3 447 aaKnown RBP6.76□□□□□ -1.33
SYNE1-225ENST00000481502 AMMECR1Q9Y4X0 333 aaPredicted RBP6.76□□□□□ -1.33
SYNE1-225ENST00000481502 NUBP2Q9Y5Y2 271 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 AUP1Q9Y679 476 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 MINOS1-NBL1R4GNA1 71 aa6.76□□□□□ -1.33
SYNE1-225ENST00000481502 TRAV39A0A0B4J263 110 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 J3QR06 171 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 TOR1AO14656 332 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 TGFAP01135 160 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 TCRBP04435 133 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 CTSDP07339 412 aaPredicted RBP6.75□□□□□ -1.33
SYNE1-225ENST00000481502 TAS2R31P59538 309 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 RND3P61587 244 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 OXA1LQ15070 435 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 HLA-DRB5Q30154 266 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 RNASE12Q5GAN4 147 aaKnown RBP6.75□□□□□ -1.33
SYNE1-225ENST00000481502 ZNF626Q68DY1 528 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 PLET1Q6UQ28 207 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 ZNF66Q6ZN08 573 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 PRR18Q8N4B5 295 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 ZNF645Q8N7E2 425 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 BVESQ8NE79 360 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 OR52L2PQ8NGH6 319 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 OR56B4Q8NH76 319 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 ENKURQ8TC29 256 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 ADTRPQ96IZ2 230 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 C18orf12Q96KH6 178 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 S1PR3Q99500 378 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 MARVELD1Q9BSK0 173 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 ABHD14AQ9BUJ0 271 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 RSRP1Q9BUV0 290 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 C7orf69Q9H7B7 122 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 MMP26Q9NRE1 261 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 ONECUT1Q9UBC0 465 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 ZNF221Q9UK13 617 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 PSG11Q9UQ72 335 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 MYO9AB2RTY4 2548 aa6.75□□□□□ -1.33
SYNE1-225ENST00000481502 WNK2Q9Y3S1 2297 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 IGHV2-26A0A0B4J1V2 119 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 OR5H14A6NHG9 310 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 RNF212BA8MTL3 300 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 ODF3BA8MYP8 253 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 LEUTXA8MZ59 168 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 M0QYG6 137 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 GPR31O00270 319 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 CD5LO43866 347 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 PRAF2O60831 178 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 EPHA1P21709 976 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 AADACP22760 399 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 NFYAP23511 347 aaPredicted RBP6.74□□□□□ -1.33
SYNE1-225ENST00000481502 OMGP23515 440 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 NFYBP25208 207 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 GNRHRP30968 328 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 BTCP35070 178 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 PPP1CCP36873 323 aaKnown RBP6.74□□□□□ -1.33
SYNE1-225ENST00000481502 SCGB2A2Q13296 93 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 SCGB2B2Q4G0G5 96 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 TMEM128Q5BJH2 165 aa6.74□□□□□ -1.33
SYNE1-225ENST00000481502 CT45A1Q5HYN5 189 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms