RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 MNDAP41218 407 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 SERPINB10P48595 397 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 RAG2P55895 527 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 AESQ08117 197 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 HMGN3Q15651 99 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 PIGYQ3MUY2 71 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 SLC22A6Q4U2R8 563 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 DMRTC1Q5HYR2 192 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 OLFML2AQ68BL7 652 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 SIGIRRQ6IA17 410 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 MZT2BQ6NZ67 158 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 C12orf54Q6X4T0 127 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 SLC25A48Q6ZT89 311 aaKnown RBP3.93□□□□□ -1.78
PTCD3-213ENST00000480102 RNF144BQ7Z419 303 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 FGFRL1Q8N441 504 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 JAGN1Q8N5M9 183 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF439Q8NDP4 499 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 TMEM104Q8NE00 496 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 OR56B1Q8NGI3 324 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 OR5D18Q8NGL1 313 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 OR13A1Q8NGR1 328 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 OR13C5Q8NGS8 318 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 C22orf15Q8WYQ4 148 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 ST6GALNAC6Q969X2 333 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 FAM3DQ96BQ1 224 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 CNBD2Q96M20 576 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 CMTM3Q96MX0 182 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 YPEL2Q96QA6 119 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 SPACA5Q96QH8 159 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 SSX3Q99909 188 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 RNF5Q99942 180 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 TMED9Q9BVK6 235 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 TMEM59Q9BXS4 323 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 LPAR5Q9H1C0 372 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 DCSTAMPQ9H295 470 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 PPIL3Q9H2H8 161 aaKnown RBP3.93□□□□□ -1.78
PTCD3-213ENST00000480102 PPA2Q9H2U2 334 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 VCX3AQ9NNX9 186 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 STEAP1Q9UHE8 339 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 RAB22AQ9UL26 194 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 STUB1Q9UNE7 303 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 DYSFO75923 2080 aa3.93□□□□□ -1.78
PTCD3-213ENST00000480102 YLPM1P49750 1951 aaKnown RBP3.93□□□□□ -1.78
PTCD3-213ENST00000480102 TENM1Q9UKZ4 2725 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 A0A087WWL8 130 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 A0A087WXM4 84 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 METTL21EPA6NDL7 271 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 C12orf77C9JDV5 145 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 RAB27BO00194 218 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 TOR1AO14656 332 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 TIMM23O14925 209 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 LANCL1O43813 399 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 CRTAPO75718 401 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-213ENST00000480102 OR2F2O95006 317 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 ARG1P05089 322 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 CTXN2P0C2S0 81 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 DTYMKP23919 212 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 MYL9P24844 172 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 CALRP27797 417 aaKnown RBP3.92□□□□□ -1.78
PTCD3-213ENST00000480102 CD1BP29016 333 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 RBMXP38159 391 aaKnown RBP3.92□□□□□ -1.78
PTCD3-213ENST00000480102 CEBPDP49716 269 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-213ENST00000480102 EFNB2P52799 333 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 GMFBP60983 142 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 PITPNAQ00169 270 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 FABP5Q01469 135 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 UNC119Q13432 240 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 RAB32Q13637 225 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 EDDM3AQ14507 147 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 KIR2DS1Q14954 304 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 MSMO1Q15800 293 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 LDLRAD2Q5SZI1 272 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 TPTE2P1Q5T6R2 138 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 RUSC1-AS1Q66K80 236 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 DHRS7BQ6IAN0 325 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-213ENST00000480102 Q6ZSV7 163 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 TRAPPC6BQ86SZ2 158 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 SATL1Q86VE3 508 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 PNKDQ8N490 385 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 COMMD1Q8N668 190 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 C3orf56Q8N813 242 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-213ENST00000480102 OR4M1Q8NGD0 313 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 OR4C13Q8NGP0 309 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 PLPPR1Q8TBJ4 325 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 MRGPRDQ8TDS7 321 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 SGCDQ92629 289 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 RFT1Q96AA3 541 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 GALMQ96C23 342 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 KCTD7Q96MP8 289 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 NEDD4LQ96PU5 975 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 NR1H4Q96RI1 486 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-213ENST00000480102 BCL7BQ9BQE9 202 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 AGMATQ9BSE5 352 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 SELENOIQ9C0D9 397 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 CCDC90BQ9GZT6 254 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 CHST6Q9GZX3 395 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 ELL3Q9HB65 397 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-213ENST00000480102 C12orf4Q9NQ89 552 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 ABCB10Q9NRK6 738 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms