RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 VHLP40337 213 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 FABP6P51161 128 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 TAS2R19P59542 299 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 ERVK-25P63136 954 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 GABRA6Q16445 453 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 CARD17Q5XLA6 110 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 CASP12Q6UXS9 341 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 AAED1Q7RTV5 226 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 HDDC2Q7Z4H3 204 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 HMGN2P46Q86SG4 172 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 COMTD1Q86VU5 262 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF584Q8IVC4 421 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 MICU2Q8IYU8 434 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 TEX29Q8N6K0 151 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 OR51F2Q8NH61 342 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 LZICQ8WZA0 190 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 STMN2Q93045 179 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 POP5Q969H6 163 aaKnown RBP3.69□□□□□ -1.82
UPF3A-205ENST00000479712 TAMM41Q96BW9 452 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 RCN3Q96D15 328 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 OR8B4Q96RC9 309 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 MBOAT4Q96T53 435 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 MFFQ9GZY8 342 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 STX18Q9P2W9 335 aaKnown RBP3.69□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF229Q9UJW7 825 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 FBXL3Q9UKT7 428 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 STARD10Q9Y365 291 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 SLC25A15Q9Y619 301 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 ARFGEF3Q5TH69 2177 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 SRRM2Q9UQ35 2752 aaKnown RBP3.68□□□□□ -1.82
UPF3A-205ENST00000479712 CIB4A0PJX0 185 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 LYNX1G3V0Z9 82 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 PLPP3O14495 311 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 DYNC1I1O14576 645 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 DCTN3O75935 186 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 LYZL6O75951 148 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 TSPAN19P0C672 248 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 LYNX1P0DP58 116 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 NR2C1P13056 603 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 SLC2A5P22732 501 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 GRPRP30550 384 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 RPS5P46782 204 aaKnown RBP3.68□□□□□ -1.82
UPF3A-205ENST00000479712 MNAT1P51948 309 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 PRRX1P54821 245 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 DLX1P56177 255 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 PRPS1P60891 318 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 SELENOWP63302 87 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 HOXC5Q00444 222 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 BNIP2Q12982 314 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 C1DQ13901 141 aaKnown RBP3.68□□□□□ -1.82
UPF3A-205ENST00000479712 RNF212Q495C1 297 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 TSPO2Q5TGU0 170 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 C1orf94Q6P1W5 598 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 TTC33Q6PID6 262 aaPredicted RBP3.68□□□□□ -1.82
UPF3A-205ENST00000479712 SLC25A48Q6ZT89 311 aaKnown RBP3.68□□□□□ -1.82
UPF3A-205ENST00000479712 DPPA2Q7Z7J5 298 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 OFCC1Q8IZS5 231 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 WDR31Q8NA23 367 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 OR4D11Q8NGI4 311 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 OR5J2Q8NH18 312 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 OR6X1Q8NH79 312 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 CLDND2Q8NHS1 167 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 FANK1Q8TC84 345 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 GEMIN6Q8WXD5 167 aaKnown RBP3.68□□□□□ -1.82
UPF3A-205ENST00000479712 RPUSD4Q96CM3 377 aaKnown RBP3.68□□□□□ -1.82
UPF3A-205ENST00000479712 ISOC1Q96CN7 298 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 PRRC1Q96M27 445 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 OR2M2Q96R28 347 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 DHRS9Q9BPW9 319 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 PRSS27Q9BQR3 290 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 CMTM6Q9NX76 183 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 NUP50Q9UKX7 468 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 ARL2BPQ9Y2Y0 163 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 CDH10Q9Y6N8 788 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
UPF3A-205ENST00000479712 A0A075B6Q4 140 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 A0A1B0GVY2 172 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 CPSF4LA6NMK7 179 aaKnown RBP3.67□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF99A8MXY4 864 aaPredicted RBP3.67□□□□□ -1.82
UPF3A-205ENST00000479712 CXCR6O00574 342 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 NME4O00746 187 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 GOSR2O14653 212 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 OPN1SWP03999 348 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 IFNW1P05000 195 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 ASAH2BP0C7U1 165 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 NQO1P15559 274 aaKnown RBP3.67□□□□□ -1.82
UPF3A-205ENST00000479712 CBR1P16152 277 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 FMO3P31513 532 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 ARR3P36575 388 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 CAV2P51636 162 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF133P52736 654 aaPredicted RBP3.67□□□□□ -1.82
UPF3A-205ENST00000479712 PSME3P61289 254 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 LIPEQ05469 1076 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 PMS2P3Q13401 168 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 HERPUD1Q15011 391 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 HIST3H3Q16695 136 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 UGT2A3Q6UWM9 527 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 C20orf196Q8IYI0 205 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 PGAM4Q8N0Y7 254 aa3.67□□□□□ -1.82
UPF3A-205ENST00000479712 OR4F15Q8NGB8 312 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms