RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 Q3ZCU0 254 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 PYHIN1Q6K0P9 492 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 FAM131AQ6UXB0 335 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 ZNF497Q6ZNH5 498 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 PPP1R27Q86WC6 154 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 TCTEX1D1Q8N7M0 179 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 LFNGQ8NES3 379 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 PXT1Q8NFP0 134 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 NPBQ8NG41 125 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 OR51A2Q8NGJ7 313 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 NEK7Q8TDX7 302 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 RDH12Q96NR8 316 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 RANGRFQ9HD47 186 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-211ENST00000479625 NDE1Q9NXR1 346 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 ETAA1Q9NY74 926 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 WARS2Q9UGM6 360 aaKnown RBP7.32□□□□□ -1.24
GPNMB-211ENST00000479625 DHDHQ9UQ10 334 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 ST3GAL6Q9Y274 331 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 ERGIC3Q9Y282 383 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 NUBP2Q9Y5Y2 271 aa7.32□□□□□ -1.24
GPNMB-211ENST00000479625 HSPG2P98160 4391 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 A0A1W2PP11 408 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 OR4C45A6NMZ5 311 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 ZAR1LA6NP61 321 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 ARPC1BO15143 372 aaKnown RBP7.31□□□□□ -1.24
GPNMB-211ENST00000479625 CNIH1O95406 144 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 HBZP02008 142 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 MT-ND4P03905 459 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 ZP3P21754 424 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 OR3A3P47888 321 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 MNAT1P51948 309 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 PLGLAQ15195 96 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 ATAD3CQ5T2N8 411 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 ZNF660Q6AZW8 331 aaPredicted RBP7.31□□□□□ -1.24
GPNMB-211ENST00000479625 CD200R1LQ6Q8B3 271 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 OR4K15Q8NH41 348 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 RGP1Q92546 391 aaPredicted RBP7.31□□□□□ -1.24
GPNMB-211ENST00000479625 LRGUKQ96M69 825 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 CLCC1Q96S66 551 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 GPER1Q99527 375 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 ABHD14AQ9BUJ0 271 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 SLA2Q9H6Q3 261 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 SIGLEC8Q9NYZ4 499 aa7.31□□□□□ -1.24
GPNMB-211ENST00000479625 SAA2-SAA4A0A096LPE2 208 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 KRTAP4-8A0A0G2JLE6 195 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 A0A0J9YWU9 116 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 RRHO14718 337 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 HTR1AP08908 422 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 SAA2P0DJI9 122 aaPredicted RBP7.3□□□□□ -1.24
GPNMB-211ENST00000479625 EDN2P20800 178 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 SERPINA2P20848 420 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 ATP6V1E1P36543 226 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 PPP1CCP36873 323 aaKnown RBP7.3□□□□□ -1.24
GPNMB-211ENST00000479625 ALDH3A2P51648 485 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 ALKBH1Q13686 389 aaKnown RBP7.3□□□□□ -1.24
GPNMB-211ENST00000479625 ZNF124Q15973 351 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 SYT6Q5T7P8 510 aaPredicted RBP7.3□□□□□ -1.24
GPNMB-211ENST00000479625 CEMP1Q6PRD7 247 aaPredicted RBP7.3□□□□□ -1.24
GPNMB-211ENST00000479625 ZNF833PQ6ZTB9 187 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 OR52L2PQ8NGH6 319 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 ASB9Q96DX5 294 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 OVOL2Q9BRP0 275 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 IFT22Q9H7X7 185 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 ZNF355PQ9NSJ1 428 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 SELENOKQ9Y6D0 94 aa7.3□□□□□ -1.24
GPNMB-211ENST00000479625 C13orf42A0A1B0GVH6 325 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 B2RBV5 119 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 OR11H12B2RN74 326 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 SPINT2O43291 252 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 SNX3O60493 162 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 CA2P00918 260 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 TFAP2AP05549 437 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 RCC1P18754 421 aaPredicted RBP7.29□□□□□ -1.24
GPNMB-211ENST00000479625 TMEM267Q0VDI3 215 aaPredicted RBP7.29□□□□□ -1.24
GPNMB-211ENST00000479625 CD300EQ496F6 205 aaPredicted RBP7.29□□□□□ -1.24
GPNMB-211ENST00000479625 MORN2Q502X0 79 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 AKIRIN2Q53H80 203 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 NHLRC3Q5JS37 347 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 GLDNQ6ZMI3 551 aaPredicted RBP7.29□□□□□ -1.24
GPNMB-211ENST00000479625 SERPINA12Q8IW75 414 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 POC5Q8NA72 575 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 OR52N1Q8NH53 320 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 TSEN15Q8WW01 171 aaKnown RBP7.29□□□□□ -1.24
GPNMB-211ENST00000479625 DNAJC9Q8WXX5 260 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 PELI1Q96FA3 418 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 OR2S2Q9NQN1 319 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 TAS2R4Q9NYW5 299 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 SLC23A1Q9UHI7 598 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 TRAPPC2LQ9UL33 140 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 MUC4Q99102 2169 aa7.29□□□□□ -1.24
GPNMB-211ENST00000479625 ZNF785A8K8V0 405 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 J3QLW9 94 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 SLC16A6O15403 523 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 FKBP6O75344 327 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 FAM107AO95990 144 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 ZNF19P17023 458 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 RAB3AP20336 220 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 CD40LGP29965 261 aa7.28□□□□□ -1.24
GPNMB-211ENST00000479625 MECP2P51608 486 aaKnown RBP7.28□□□□□ -1.24
GPNMB-211ENST00000479625 CCR9P51686 369 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms