RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ZNF585BQ52M93 769 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 ZNF880Q6PDB4 577 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 ZNF429Q86V71 674 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 FER1L6-AS2Q96M78 137 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 TRIB1Q96RU8 372 aa9.13□□□□□ -0.95
VPS52-217ENST00000478934 SCAF4O95104 1147 aaKnown RBP9.12□□□□□ -0.95
VPS52-217ENST00000478934 NXPH2O95156 264 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 MDKP21741 143 aaPredicted RBP9.12□□□□□ -0.95
VPS52-217ENST00000478934 RHEBQ15382 184 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 TBC1D28Q2M2D7 210 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 RNF212Q495C1 297 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 CDPF1Q6NVV7 123 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 OR1L1Q8NH94 360 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 Q8WTZ3 238 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 RBMXL1Q96E39 390 aaKnown RBP9.12□□□□□ -0.95
VPS52-217ENST00000478934 ZNF665Q9H7R5 613 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 UFSP2Q9NUQ7 469 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 WSB1Q9Y6I7 421 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 HEATR1Q9H583 2144 aaKnown RBP9.12□□□□□ -0.95
VPS52-217ENST00000478934 AKAP13Q12802 2813 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 CLEC18AA5D8T8 446 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 RAMP3O60896 148 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 CTXN2P0C2S0 81 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 ELLP55199 621 aaPredicted RBP9.12□□□□□ -0.95
VPS52-217ENST00000478934 VWA1Q6PCB0 445 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 ZNF497Q6ZNH5 498 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 Q6ZR03 302 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 CLEC18CQ8NCF0 446 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 GSN-AS1Q9NRJ2 163 aa9.12□□□□□ -0.95
VPS52-217ENST00000478934 CADP27708 2225 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 IGHV2-5P01817 119 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 S100A9P06702 114 aaKnown RBP9.11□□□□□ -0.95
VPS52-217ENST00000478934 FABP1P07148 127 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 PAX6P26367 422 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 ERVK11-1P61568 191 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 RAB11AP62491 216 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 AESQ08117 197 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 FOXF2Q12947 444 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 ZNF674Q2M3X9 581 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 PRAMEF6Q5VXH4 476 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 HAPLN4Q86UW8 402 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 ZNF808Q8N4W9 903 aaPredicted RBP9.11□□□□□ -0.95
VPS52-217ENST00000478934 FDCSPQ8NFU4 85 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 OR52L2PQ8NGH6 319 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 MUCL1Q96DR8 90 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 PLPPR2Q96GM1 343 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 C5orf30Q96GV9 206 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 ATP5SQ99766 215 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 RTL8AQ9BWD3 113 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 PLK3Q9H4B4 646 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 CDH20Q9HBT6 801 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 MSL2Q9HCI7 577 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 RPRMQ9NS64 109 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 METRNQ9UJH8 293 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 CEP250Q9BV73 2442 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 DMXL2Q8TDJ6 3036 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 ATMQ13315 3056 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 TRAV20A0A0B4J274 112 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 MLNRO43193 412 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 DEFA4P12838 97 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 TNFSF10P50591 281 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 NDUFA6P56556 154 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 UBE2NP61088 152 aaKnown RBP9.11□□□□□ -0.95
VPS52-217ENST00000478934 SPANXN5Q5MJ07 72 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 HEPN1Q6WQI6 88 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 BEND4Q6ZU67 534 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 LFNGQ8NES3 379 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 CLDND2Q8NHS1 167 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 CABLES2Q9BTV7 478 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 PKIBQ9C010 78 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 RIMS4Q9H426 269 aaPredicted RBP9.11□□□□□ -0.95
VPS52-217ENST00000478934 ZDHHC11Q9H8X9 412 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 OBP2BQ9NPH6 170 aa9.11□□□□□ -0.95
VPS52-217ENST00000478934 SPAARA0A1B0GVQ0 90 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 FABP6P51161 128 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 KIAA0141Q14154 515 aaPredicted RBP9.1□□□□□ -0.95
VPS52-217ENST00000478934 ZNF726P1Q15940 193 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 C4orf17Q53FE4 359 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 SPINK9Q5DT21 86 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 GFI1BQ5VTD9 330 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 OR8G2PQ6IF36 304 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 BTNL3Q6UXE8 466 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 STX12Q86Y82 276 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 DRAM1Q8N682 238 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 KLF14Q8TD94 323 aaPredicted RBP9.1□□□□□ -0.95
VPS52-217ENST00000478934 POM121Q96HA1 1249 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 DCTN5Q9BTE1 182 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 TUBA4BQ9H853 241 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 KIAA1456Q9P272 454 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 MIOXQ9UGB7 285 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 GVINP1Q7Z2Y8 2422 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 OTOGLQ3ZCN5 2332 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 TRBV6-6A0A0A6YYG2 114 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 IGHV3-43A0A0B4J1X8 118 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 LRP5LA4QPB2 252 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.1□□□□□ -0.95
VPS52-217ENST00000478934 CYB5BO43169 146 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 CD55P08174 381 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 PGA5P0DJD9 388 aa9.1□□□□□ -0.95
VPS52-217ENST00000478934 IGHV3-43DP0DP04 118 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms