RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 TMEM212A6NML5 194 aa13.11□□□□□ -0.31
VIM-204ENST00000478746 RGS11O94810 467 aa13.11□□□□□ -0.31
VIM-204ENST00000478746 EGR2P11161 476 aaPredicted RBP13.11□□□□□ -0.31
VIM-204ENST00000478746 SERPINA2P20848 420 aa13.11□□□□□ -0.31
VIM-204ENST00000478746 ZP3P21754 424 aa13.11□□□□□ -0.31
VIM-204ENST00000478746 ACTBL2Q562R1 376 aa13.11□□□□□ -0.31
VIM-204ENST00000478746 CD200R1LQ6Q8B3 271 aa13.11□□□□□ -0.31
VIM-204ENST00000478746 OR4K15Q8NH41 348 aa13.11□□□□□ -0.31
VIM-204ENST00000478746 PDCD1LG2Q9BQ51 273 aa13.11□□□□□ -0.31
VIM-204ENST00000478746 RANGRFQ9HD47 186 aaPredicted RBP13.11□□□□□ -0.31
VIM-204ENST00000478746 PAK1IP1Q9NWT1 392 aaPredicted RBP13.11□□□□□ -0.31
VIM-204ENST00000478746 CNOT2Q9NZN8 540 aaKnown RBP13.11□□□□□ -0.31
VIM-204ENST00000478746 OAZ3Q9UMX2 235 aa13.11□□□□□ -0.31
VIM-204ENST00000478746 MCRIP1C9JLW8 97 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 ADARB1P78563 741 aaKnown RBP13.1□□□□□ -0.31
VIM-204ENST00000478746 PLGLAQ15195 96 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 AKIRIN2Q53H80 203 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 SLC25A30Q5SVS4 291 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 MEDAGQ5VYS4 303 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 TRAT1Q6PIZ9 186 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 UNQ5815/PRO19632Q6UWF5 114 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 LHFPL3Q86UP9 236 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 PPP1R27Q86WC6 154 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 ODF3L1Q8IXM7 274 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 LINC00476Q8WZB0 136 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 ABHD14AQ9BUJ0 271 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 JAM3Q9BX67 310 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 FBXL15Q9H469 300 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 SLA2Q9H6Q3 261 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 ETAA1Q9NY74 926 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 TAS2R4Q9NYW5 299 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 EXOGQ9Y2C4 368 aaKnown RBP13.1□□□□□ -0.31
VIM-204ENST00000478746 CEPT1Q9Y6K0 416 aa13.1□□□□□ -0.31
VIM-204ENST00000478746 FCN1O00602 326 aa13.09□□□□□ -0.31
VIM-204ENST00000478746 LY6G6CO95867 125 aa13.09□□□□□ -0.31
VIM-204ENST00000478746 TRGV3P03979 118 aa13.09□□□□□ -0.31
VIM-204ENST00000478746 RCC1P18754 421 aaPredicted RBP13.09□□□□□ -0.31
VIM-204ENST00000478746 SOX2P48431 317 aa13.09□□□□□ -0.31
VIM-204ENST00000478746 SNRPGP62308 76 aaKnown RBP13.09□□□□□ -0.31
VIM-204ENST00000478746 KLF5Q13887 457 aaPredicted RBP13.09□□□□□ -0.31
VIM-204ENST00000478746 SYS1Q8N2H4 156 aa13.09□□□□□ -0.31
VIM-204ENST00000478746 THAP7Q9BT49 309 aaPredicted RBP13.09□□□□□ -0.31
VIM-204ENST00000478746 C9orf16Q9BUW7 83 aa13.09□□□□□ -0.31
VIM-204ENST00000478746 ALG8Q9BVK2 526 aa13.09□□□□□ -0.31
VIM-204ENST00000478746 ISG20L2Q9H9L3 353 aaKnown RBP13.09□□□□□ -0.31
VIM-204ENST00000478746 SPACA1Q9HBV2 294 aa13.09□□□□□ -0.31
VIM-204ENST00000478746 HERC2O95714 4834 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 SNTNA6NMZ2 147 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 RRHO14718 337 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 ZNF780AO75290 641 aaPredicted RBP13.08□□□□□ -0.32
VIM-204ENST00000478746 GTF2F2P13984 249 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 ZNF93P35789 620 aaPredicted RBP13.08□□□□□ -0.32
VIM-204ENST00000478746 OR3A3P47888 321 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 GNMTQ14749 295 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 RNLSQ5VYX0 342 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 IL34Q6ZMJ4 242 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 LINC00322Q6ZN03 302 aaPredicted RBP13.08□□□□□ -0.32
VIM-204ENST00000478746 LFNGQ8NES3 379 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 OR52L2PQ8NGH6 319 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 OR9G4Q8NGQ1 327 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 LGALS12Q96DT0 336 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 MRPS24Q96EL2 167 aaKnown RBP13.08□□□□□ -0.32
VIM-204ENST00000478746 FAM103A1Q9BTL3 118 aaKnown RBP13.08□□□□□ -0.32
VIM-204ENST00000478746 TAF9BQ9HBM6 251 aa13.08□□□□□ -0.32
VIM-204ENST00000478746 A0A1W2PP11 408 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 SHISA3A0PJX4 238 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 ANKRD34BA5PLL1 514 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 E9PI62 339 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 PPP1CCP36873 323 aaKnown RBP13.07□□□□□ -0.32
VIM-204ENST00000478746 MRPL28Q13084 256 aaKnown RBP13.07□□□□□ -0.32
VIM-204ENST00000478746 SLC22A6Q4U2R8 563 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 ZNF833PQ6ZTB9 187 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 RDH12Q96NR8 316 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 TMEM138Q9NPI0 162 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 ZNF355PQ9NSJ1 428 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 KCNIP1Q9NZI2 227 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 GAB2Q9UQC2 676 aa13.07□□□□□ -0.32
VIM-204ENST00000478746 C13orf42A0A1B0GVH6 325 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 EI24O14681 340 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 TFAP2AP05549 437 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 CD2P06729 351 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 GBX2P52951 348 aaPredicted RBP13.06□□□□□ -0.32
VIM-204ENST00000478746 SYNJ2BPP57105 145 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 RIPK1Q13546 671 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 DDI2Q5TDH0 399 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 RAB12Q6IQ22 244 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 FAM131AQ6UXB0 335 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 GAPTQ8N292 157 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 Q8N402 240 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 CBR4Q8N4T8 237 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 DDB2Q92466 427 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 CLCC1Q96S66 551 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 RCC2Q9P258 522 aaKnown RBP13.06□□□□□ -0.32
VIM-204ENST00000478746 JPT1Q9UK76 154 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 ORC6Q9Y5N6 252 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 PEX16Q9Y5Y5 336 aa13.06□□□□□ -0.32
VIM-204ENST00000478746 SAA2-SAA4A0A096LPE2 208 aa13.05□□□□□ -0.32
VIM-204ENST00000478746 YPEL1O60688 119 aa13.05□□□□□ -0.32
VIM-204ENST00000478746 ATP6V1G2O95670 118 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms