RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 RBM14Q96PK6 669 aaKnown RBP5.07□□□□□ -1.6
HOXB3-209ENST00000478644 MND1Q9BWT6 205 aa5.07□□□□□ -1.6
HOXB3-209ENST00000478644 DUX4Q9UBX2 424 aa5.07□□□□□ -1.6
HOXB3-209ENST00000478644 TCF19Q9Y242 345 aa5.07□□□□□ -1.6
HOXB3-209ENST00000478644 MRPS7Q9Y2R9 242 aaKnown RBP5.07□□□□□ -1.6
HOXB3-209ENST00000478644 LSM2Q9Y333 95 aaKnown RBP5.07□□□□□ -1.6
HOXB3-209ENST00000478644 SOX21Q9Y651 276 aaPredicted RBP5.07□□□□□ -1.6
HOXB3-209ENST00000478644 TRGV10A0A0A0MS01 117 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 TRBV5-7A0A0A0MS05 114 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 IGKV1-12A0A0C4DH73 117 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 LINC00854A0A1B0GVQ3 168 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 ODF3BA8MYP8 253 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 LEUTXA8MZ59 168 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 DENRO43583 198 aaKnown RBP5.06□□□□□ -1.6
HOXB3-209ENST00000478644 ZNF737O75373 536 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 IGKV1D-12P01611 117 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 TFF1P04155 84 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 ARG1P05089 322 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 CSN2P05814 226 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 IGFBP3P17936 291 aaPredicted RBP5.06□□□□□ -1.6
HOXB3-209ENST00000478644 GALP22466 123 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 HTR1DP28221 377 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 MNDAP41218 407 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 NPBWR2P48146 333 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 SOX2P48431 317 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 KCNJ3P48549 501 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 EDDM3BP56851 147 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 ZP1P60852 638 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 SRSF4Q08170 494 aaKnown RBP5.06□□□□□ -1.6
HOXB3-209ENST00000478644 SPHARQ15513 63 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 RBM48Q5RL73 367 aaKnown RBP5.06□□□□□ -1.6
HOXB3-209ENST00000478644 ELP2Q6IA86 826 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 TEX38Q6PEX7 206 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 PRSS48Q7RTY5 328 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 FAM58AQ8N1B3 248 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 FGFRL1Q8N441 504 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 PNKDQ8N490 385 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 C11orf42Q8N5U0 333 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 MS4A15Q8N5U1 240 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 ASCC1Q8N9N2 400 aaKnown RBP5.06□□□□□ -1.6
HOXB3-209ENST00000478644 PXT1Q8NFP0 134 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 OR10A7Q8NGE5 316 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 TMEM106AQ96A25 262 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 RRNAD1Q96FB5 475 aaKnown RBP5.06□□□□□ -1.6
HOXB3-209ENST00000478644 MS4A10Q96PG2 267 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 CLEC7AQ9BXN2 247 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 GON7Q9BXV9 100 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 TMEM133Q9H2Q1 129 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 HMG20AQ9NP66 347 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 RAB9BQ9NP90 201 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 ISYNA1Q9NPH2 558 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 TMEM138Q9NPI0 162 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 C19orf12Q9NSK7 152 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 RBFOX1Q9NWB1 397 aaKnown RBP5.06□□□□□ -1.6
HOXB3-209ENST00000478644 PAK1IP1Q9NWT1 392 aaPredicted RBP5.06□□□□□ -1.6
HOXB3-209ENST00000478644 TAS2R4Q9NYW5 299 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 OR14J1Q9UGF5 321 aa5.06□□□□□ -1.6
HOXB3-209ENST00000478644 A6NDX4 124 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 TOR1AO14656 332 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 MRPS14O60783 128 aaKnown RBP5.05□□□□□ -1.6
HOXB3-209ENST00000478644 HAND1O96004 215 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 IL1AP01583 271 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 HCKP08631 526 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 FAM106CPP0CH98 169 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 CELP19835 753 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 BCL3P20749 454 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 BDKRB2P30411 391 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 PTGFRP43088 359 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 VDAC2P45880 294 aaPredicted RBP5.05□□□□□ -1.6
HOXB3-209ENST00000478644 POU3F4P49335 361 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 PPP3R1P63098 170 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 SSBP2P81877 361 aaPredicted RBP5.05□□□□□ -1.6
HOXB3-209ENST00000478644 PAX5Q02548 391 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 KLRD1Q13241 179 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 TPBGQ13641 420 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 GRK1Q15835 563 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 FAM189A2Q15884 450 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 PLAC9Q5JTB6 97 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 HCP5Q6MZN7 132 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 UNQ9370/PRO34162Q6UXP9 181 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 HEPN1Q6WQI6 88 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 TBC1D26Q86UD7 250 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 COMMD1Q8N668 190 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 KLHDC1Q8N7A1 406 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 ZFP41Q8N8Y5 198 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 OR52N4Q8NGI2 321 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 OR4D6Q8NGJ1 314 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 OR51A2Q8NGJ7 313 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 EMG1Q92979 244 aaKnown RBP5.05□□□□□ -1.6
HOXB3-209ENST00000478644 CNBD2Q96M20 576 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 HARBI1Q96MB7 349 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 DERL3Q96Q80 235 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 SPACA5Q96QH8 159 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 OR5M11Q96RB7 305 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 ZNF184Q99676 751 aaPredicted RBP5.05□□□□□ -1.6
HOXB3-209ENST00000478644 YTHDF1Q9BYJ9 559 aaKnown RBP5.05□□□□□ -1.6
HOXB3-209ENST00000478644 BARHL1Q9BZE3 327 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 Q9H521 79 aa5.05□□□□□ -1.6
HOXB3-209ENST00000478644 EXOSC4Q9NPD3 245 aaKnown RBP5.05□□□□□ -1.6
HOXB3-209ENST00000478644 IL36GQ9NZH8 169 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms