RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 PHYHD1Q5SRE7 291 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 TMEM65Q6PI78 240 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 SSMEM1Q8WWF3 244 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 DOCK9Q9BZ29 2069 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 MST1P26927 711 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 H3F3AP84243 136 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 NHLH2Q02577 135 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 ZNF552Q9H707 407 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-208ENST00000478423 PHF3Q92576 2039 aaKnown RBP12.22□□□□□ -0.45
NPHP4-208ENST00000478423 TMEM218A2RU14 115 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 CHEK1O14757 476 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 GYPAP02724 150 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 ADRA2AP08913 450 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 CEACAM1P13688 526 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 ZNF345Q14585 488 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 ANGPTL6Q8NI99 470 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 MRPL13Q9BYD1 178 aaKnown RBP12.22□□□□□ -0.45
NPHP4-208ENST00000478423 SH2D2AQ9NP31 389 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 OR5AC2Q9NZP5 309 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 THYN1Q9P016 225 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 RBFOX3A6NFN3 312 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 NTN3O00634 580 aaPredicted RBP12.22□□□□□ -0.45
NPHP4-208ENST00000478423 ORM2P19652 201 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 TMEM241Q24JQ0 296 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 NR2C2APQ86WQ0 139 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 HEXA-AS1Q9H8Q6 139 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 CUL9Q8IWT3 2517 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 LEUTXA8MZ59 168 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 MFNGO00587 321 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 NTF3P20783 257 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 TMPRSS3P57727 454 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 UNC119Q13432 240 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 OVCH2Q7RTZ1 564 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 BVESQ8NE79 360 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 FAM131CQ96AQ9 280 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 LINC00052Q96N35 136 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 CACNA1AO00555 2505 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 MGAMO43451 1857 aa12.22□□□□□ -0.45
NPHP4-208ENST00000478423 DUXBA0A1W2PPF3 345 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 H0Y8G0 127 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 CLDN34H7C241 214 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 NSUN5P2Q63ZY6 315 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 FAM24BQ8N5W8 94 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 OR1L1Q8NH94 360 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 MARS2Q96GW9 593 aaKnown RBP12.21□□□□□ -0.45
NPHP4-208ENST00000478423 RHOVQ96L33 236 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 FAM208BQ5VWN6 2430 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 ACACBO00763 2458 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 TGOLN2O43493 480 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 SFTPCP11686 197 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 ATP6V0CP27449 155 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 AARDQ4LEZ3 155 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 ASCL5Q7RTU5 278 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 TMEM45BQ96B21 275 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 GUCD1Q96NT3 240 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 TMEM222Q9H0R3 208 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 C5orf66Q9H5L9 145 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 GP6Q9HCN6 339 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 PRNDQ9UKY0 176 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 COL4A6Q14031 1691 aa12.21□□□□□ -0.45
NPHP4-208ENST00000478423 ZNF708P17019 499 aa12.21□□□□□ -0.46
NPHP4-208ENST00000478423 NPY1RP25929 384 aa12.21□□□□□ -0.46
NPHP4-208ENST00000478423 H2BFSP57053 126 aa12.21□□□□□ -0.46
NPHP4-208ENST00000478423 ZDHHC11Q9H8X9 412 aa12.21□□□□□ -0.46
NPHP4-208ENST00000478423 ODAMA1E959 279 aa12.21□□□□□ -0.46
NPHP4-208ENST00000478423 RAB29O14966 203 aa12.21□□□□□ -0.46
NPHP4-208ENST00000478423 OR4A8P0C604 315 aa12.21□□□□□ -0.46
NPHP4-208ENST00000478423 KIAA2026Q5HYC2 2103 aa12.21□□□□□ -0.46
NPHP4-208ENST00000478423 VWA1Q6PCB0 445 aa12.21□□□□□ -0.46
NPHP4-208ENST00000478423 TMEM252Q8N6L7 170 aa12.21□□□□□ -0.46
NPHP4-208ENST00000478423 A0A087WV48 116 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 A0A1B0GTI1 187 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 ANKRD55Q3KP44 614 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 CISD1Q9NZ45 108 aaKnown RBP12.2□□□□□ -0.46
NPHP4-208ENST00000478423 ZNF785A8K8V0 405 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 PRR32B1ATL7 298 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 SYNGR3O43761 229 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 MBPP02686 304 aaPredicted RBP12.2□□□□□ -0.46
NPHP4-208ENST00000478423 SEC11BP0C7V7 166 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 CTRB1P17538 263 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 FAM78BQ5VT40 261 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 CTRB2Q6GPI1 263 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 ABHD14AQ9BUJ0 271 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 hCG_38984A0A1B0GV85 526 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 BRS3P32247 399 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 KCNMB1Q16558 191 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 CXorf66Q5JRM2 361 aaPredicted RBP12.2□□□□□ -0.46
NPHP4-208ENST00000478423 OR11H4Q8NGC9 324 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 LPAR2Q9HBW0 351 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 DEPPQ9NTK1 212 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 SPG11Q96JI7 2443 aa12.2□□□□□ -0.46
NPHP4-208ENST00000478423 J3QR06 171 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 DEFA6Q01524 100 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 Q5BKY6 102 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 SAXO1Q8IYX7 474 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 SNX22Q96L94 193 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 AAMDCQ9H7C9 122 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 PTPRDP23468 1912 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 DBX1A6NMT0 343 aa12.19□□□□□ -0.46
NPHP4-208ENST00000478423 APELAP0DMC3 54 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms