RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CEACAM3P40198 252 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 MNDAP41218 407 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 RBP2P50120 134 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 GNG10P50151 68 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 CRISP1P54107 249 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 PRRX1P54821 245 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 ZP1P60852 638 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 CDC42P60953 191 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 ZNF85Q03923 595 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 SCN1BQ07699 218 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 ZNF816Q0VGE8 651 aaPredicted RBP3.51□□□□□ -1.85
CKS1B-207ENST00000477676 HES1Q14469 280 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 PTGES3Q15185 160 aaKnown RBP3.51□□□□□ -1.85
CKS1B-207ENST00000477676 LTC4SQ16873 150 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 KRBOX4Q5JUW0 171 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 SPIN3Q5JUX0 258 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 RSBN1Q5VWQ0 802 aaPredicted RBP3.51□□□□□ -1.85
CKS1B-207ENST00000477676 FAHD1Q6P587 224 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 TEX38Q6PEX7 206 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 C5orf24Q7Z6I8 188 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 HAPLN4Q86UW8 402 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 DHFR2Q86XF0 187 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 TGIF2LXQ8IUE1 241 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 ENTHD1Q8IYW4 607 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 OR8H3Q8N146 312 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 FAM71E2Q8N5Q1 922 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 COMMD1Q8N668 190 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 TCEANCQ8N8B7 351 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 ZNF491Q8N8L2 437 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 DNAAF1Q8NEP3 725 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 OR11H1Q8NG94 326 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 OR51A4Q8NGJ6 313 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 OR5D18Q8NGL1 313 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 OR8U1Q8NH10 309 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 OR9G1Q8NH87 305 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 UBALD1Q8TB05 177 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 CANT1Q8WVQ1 401 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 C4orf3Q8WVX3 66 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 DCUN1D4Q92564 292 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 ST6GALNAC6Q969X2 333 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 RPEQ96AT9 228 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 FGGYQ96C11 551 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 BORCS8Q96FH0 119 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 OR5B12Q96R08 314 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 FAM107BQ9H098 131 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 ALX4Q9H161 411 aaPredicted RBP3.51□□□□□ -1.85
CKS1B-207ENST00000477676 GAL3ST2Q9H3Q3 398 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 MOB1AQ9H8S9 216 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 EXOSC4Q9NPD3 245 aaKnown RBP3.51□□□□□ -1.85
CKS1B-207ENST00000477676 CLN6Q9NWW5 311 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 CALYQ9NYX4 217 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 IDI2-AS1Q9NZ38 188 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 KIAA1456Q9P272 454 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 KIF25Q9UIL4 384 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 DHDHQ9UQ10 334 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 TMEM14AQ9Y6G1 99 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 LRP1BQ9NZR2 4599 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 IFITM10A6NMD0 228 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 ZNF670-ZNF695F2Z2N8 137 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 G3V318 75 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 C15orf65H3BRN8 121 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 HSPB6O14558 160 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 HSD17B6O14756 317 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 SH2D1BO14796 132 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 SOX15O60248 233 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 TSC22D2O75157 780 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 GATBO75879 557 aaKnown RBP3.5□□□□□ -1.85
CKS1B-207ENST00000477676 IL1AP01583 271 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 ZNF44P15621 663 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 CNTFRP26992 372 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 POLR2IP36954 125 aaKnown RBP3.5□□□□□ -1.85
CKS1B-207ENST00000477676 GLP1RP43220 463 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 VEGFCP49767 419 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 RAB7AP51149 207 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 ATP1B3P54709 279 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 MTCP1P56278 107 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 SLC35B1P78383 322 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 NDPQ00604 133 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 RUNX1Q01196 453 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 MADCAM1Q13477 382 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 GK3PQ14409 553 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 FAM98BQ52LJ0 330 aaKnown RBP3.5□□□□□ -1.85
CKS1B-207ENST00000477676 TP53I3Q53FA7 332 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 CXorf66Q5JRM2 361 aaPredicted RBP3.5□□□□□ -1.85
CKS1B-207ENST00000477676 NXNL2Q5VZ03 156 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 C12orf73Q69YU5 71 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 UTS2BQ765I0 119 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 FOXRED2Q8IWF2 684 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 Q8IYB0 196 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 YIPF7Q8N8F6 280 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 OR4D6Q8NGJ1 314 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 OR1N2Q8NGR9 330 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 OR2G2Q8NGZ5 317 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 TMEM163Q8TC26 289 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 MRGPRDQ8TDS7 321 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 CASTOR1Q8WTX7 329 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 DLX4Q92988 240 aaPredicted RBP3.5□□□□□ -1.85
CKS1B-207ENST00000477676 CREB3L1Q96BA8 519 aa3.5□□□□□ -1.85
CKS1B-207ENST00000477676 CCDC124Q96CT7 223 aaKnown RBP3.5□□□□□ -1.85
CKS1B-207ENST00000477676 KCTD7Q96MP8 289 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms