RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 HSPB11Q9Y547 144 aa9.99□□□□□ -0.81
PRPF39-203ENST00000477626 ZFYVE26Q68DK2 2539 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 KBTBD11-OT1A0A1B0GTJ5 212 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 LGALS8O00214 317 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 MBPP02686 304 aaPredicted RBP9.98□□□□□ -0.81
PRPF39-203ENST00000477626 PHLDA2Q53GA4 152 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 FIP1L1Q6UN15 594 aaKnown RBP9.98□□□□□ -0.81
PRPF39-203ENST00000477626 TMUB2Q71RG4 321 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 COQ8AQ8NI60 647 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 SLC5A7Q9GZV3 580 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 NGBQ9NPG2 151 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 CLN8Q9UBY8 286 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 PPP1R3CQ9UQK1 317 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 USP9XQ93008 2570 aaPredicted RBP9.98□□□□□ -0.81
PRPF39-203ENST00000477626 A6NNC1 897 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 LINC00473A8K010 186 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 PSMB6P28072 239 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 PAX9P55771 341 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 SGPP2Q8IWX5 399 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 LY6G5BQ8NDX9 201 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 MRGPRDQ8TDS7 321 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 SEC22AQ96IW7 307 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 CLEC4MQ9H2X3 399 aaPredicted RBP9.98□□□□□ -0.81
PRPF39-203ENST00000477626 KCNJ16Q9NPI9 418 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 SDHAF2Q9NX18 166 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 PLA2G2EQ9NZK7 142 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 GLS2Q9UI32 602 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 SLC31A2O15432 143 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 TMEM50AO95807 157 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 GYPAP02724 150 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 CEACAM6P40199 344 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 ZNF137PP52743 207 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 ID3Q02535 119 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 OR10A7Q8NGE5 316 aa9.98□□□□□ -0.81
PRPF39-203ENST00000477626 METTL8Q9H825 291 aaKnown RBP9.98□□□□□ -0.81
PRPF39-203ENST00000477626 CHMP1AQ9HD42 196 aaPredicted RBP9.98□□□□□ -0.81
PRPF39-203ENST00000477626 KCNAB3O43448 404 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 HKR1P10072 659 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 FXYD4P59646 89 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 C6orf183Q5T699 404 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 ZBTB34Q8NCN2 500 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 ZNF680Q8NEM1 530 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 CISD1Q9NZ45 108 aaKnown RBP9.97□□□□□ -0.81
PRPF39-203ENST00000477626 TRAPPC2LQ9UL33 140 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 RP1L1Q8IWN7 2480 aaPredicted RBP9.97□□□□□ -0.81
PRPF39-203ENST00000477626 TUBAL3A6NHL2 446 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 VAMP1P23763 118 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 COL8A2P25067 703 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 SSTR2P30874 369 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 GMFBP60983 142 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 FGL1Q08830 312 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 CASTOR1Q8WTX7 329 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 TOMM40LQ969M1 308 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 ZNF665Q9H7R5 613 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 ABCA2Q9BZC7 2435 aa9.97□□□□□ -0.81
PRPF39-203ENST00000477626 A6NLC8 198 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 K7EPK0 472 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 ZG16O60844 167 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 TNFRSF1AP19438 455 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 GLP1RP43220 463 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 MRPS15P82914 257 aaKnown RBP9.96□□□□□ -0.81
PRPF39-203ENST00000477626 PAX2Q02962 417 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 RAB32Q13637 225 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 MUC15Q8N387 334 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 FAM71E2Q8N5Q1 922 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 CA5BP1Q8WTZ4 195 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 LSM10Q969L4 123 aaKnown RBP9.96□□□□□ -0.81
PRPF39-203ENST00000477626 GALMQ96C23 342 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 ABHD14BQ96IU4 210 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 SAP30LQ9HAJ7 183 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 C19orf12Q9NSK7 152 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 MBD2Q9UBB5 411 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 NDRG3Q9UGV2 375 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 TMED3Q9Y3Q3 217 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 PGAM2P15259 253 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 CT45A1Q5HYN5 189 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 GSG1LQ6UXU4 331 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 CT45A3Q8NHU0 189 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 GFOD1Q9NXC2 390 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 CALYQ9NYX4 217 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 COQ3Q9NZJ6 369 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 LINC00312Q9Y6C7 94 aa9.96□□□□□ -0.81
PRPF39-203ENST00000477626 RAMP3O60896 148 aa9.96□□□□□ -0.82
PRPF39-203ENST00000477626 GZMHP20718 246 aa9.96□□□□□ -0.82
PRPF39-203ENST00000477626 PPP1CCP36873 323 aaKnown RBP9.96□□□□□ -0.82
PRPF39-203ENST00000477626 MEF2CQ06413 473 aaPredicted RBP9.96□□□□□ -0.82
PRPF39-203ENST00000477626 ZNF273Q14593 569 aa9.96□□□□□ -0.82
PRPF39-203ENST00000477626 OPCMLQ14982 345 aa9.96□□□□□ -0.82
PRPF39-203ENST00000477626 Q3ZCU0 254 aa9.96□□□□□ -0.82
PRPF39-203ENST00000477626 ST6GALNAC6Q969X2 333 aa9.96□□□□□ -0.82
PRPF39-203ENST00000477626 CCL13Q99616 98 aa9.96□□□□□ -0.82
PRPF39-203ENST00000477626 CUBNO60494 3623 aa9.96□□□□□ -0.82
PRPF39-203ENST00000477626 HSD17B6O14756 317 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 OR2F2O95006 317 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 S100A11P31949 105 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 OR2F1Q13607 317 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 MRGPRG-AS1Q2M3A8 158 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 TMEM30BQ3MIR4 351 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 TMEM200BQ69YZ2 307 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 FAM219AQ8IW50 185 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms