RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ZNF439Q8NDP4 499 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 OR2AK2Q8NG84 335 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 OR52L2PQ8NGH6 319 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 OR10V1Q8NGI7 309 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 CT45A3Q8NHU0 189 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 TOMM40LQ969M1 308 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 DUX5Q96PT3 197 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 ABHD14AQ9BUJ0 271 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 CHIAQ9BZP6 476 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 RSL24D1Q9UHA3 163 aaKnown RBP10.6□□□□□ -0.71
TOP3A-205ENST00000477508 SLC23A1Q9UHI7 598 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 ADAM30Q9UKF2 790 aa10.6□□□□□ -0.71
TOP3A-205ENST00000477508 RNF212BA8MTL3 300 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 HPGDSO60760 199 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 PPP1CCP36873 323 aaKnown RBP10.59□□□□□ -0.71
TOP3A-205ENST00000477508 CEACAM6P40199 344 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 TAS2R20P59543 309 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 ZNF816Q0VGE8 651 aaPredicted RBP10.59□□□□□ -0.71
TOP3A-205ENST00000477508 KRTAP24-1Q3LI83 254 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 UTF1Q5T230 341 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 DYNAPQ8N1N2 210 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 OR10J5Q8NHC4 309 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 C15orf40Q8WUR7 153 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 NUDCD2Q8WVJ2 157 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 CABLES2Q9BTV7 478 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 ST6GALNAC5Q9BVH7 336 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 RBM38Q9H0Z9 239 aaKnown RBP10.59□□□□□ -0.71
TOP3A-205ENST00000477508 ZNF230Q9UIE0 474 aaPredicted RBP10.59□□□□□ -0.71
TOP3A-205ENST00000477508 ELF5Q9UKW6 265 aaPredicted RBP10.59□□□□□ -0.71
TOP3A-205ENST00000477508 COL6A5A8TX70 2615 aa10.59□□□□□ -0.71
TOP3A-205ENST00000477508 A0A1W2PPE3 182 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 FAM25AB3EWG3 89 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 FAM25CB3EWG5 89 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 FAM25GB3EWG6 89 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 GPR137BO60478 399 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 EIF4EP06730 217 aaKnown RBP10.58□□□□□ -0.72
TOP3A-205ENST00000477508 GSTT2P0CG29 244 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 GSTT2BP0CG30 244 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 ELK1P19419 428 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 PRSS3P35030 304 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 ZNF134P52741 427 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 SRSF2Q01130 221 aaKnown RBP10.58□□□□□ -0.72
TOP3A-205ENST00000477508 GNMTQ14749 295 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 IZUMO1Q8IYV9 350 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 ST6GALNAC6Q969X2 333 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 C19orf24Q9BVV8 132 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 TOLLIPQ9H0E2 274 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 TNFRSF19Q9NS68 423 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 PIPOXQ9P0Z9 390 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 TCF19Q9Y242 345 aa10.58□□□□□ -0.72
TOP3A-205ENST00000477508 TRBV6-7A0A0A0MS04 114 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 FAM181BA6NEQ2 426 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 HSD17B6O14756 317 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 RAB29O14966 203 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 RGS5O15539 181 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 LANCL1O43813 399 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 SSX5O60225 188 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 FAM106CPP0CH98 169 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 HKR1P10072 659 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 PAX6P26367 422 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 ACTG1P63261 375 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 PLA1AQ53H76 456 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 FAM71F2Q6NXP2 309 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 CNIH2Q6PI25 160 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 C16orf82Q7Z2V1 217 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 C5orf24Q7Z6I8 188 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 HOGA1Q86XE5 327 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 THNSL2Q86YJ6 484 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 TGIF2LXQ8IUE1 241 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 LYG1Q8N1E2 194 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 PIFOQ8TCI5 191 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 GCDHQ92947 438 aaPredicted RBP10.57□□□□□ -0.72
TOP3A-205ENST00000477508 S1PR3Q99500 378 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 GINS4Q9BRT9 223 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 SCPEP1Q9HB40 452 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 RABL2AQ9UBK7 228 aaPredicted RBP10.57□□□□□ -0.72
TOP3A-205ENST00000477508 ANXA10Q9UJ72 324 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 RABL2BQ9UNT1 228 aa10.57□□□□□ -0.72
TOP3A-205ENST00000477508 MRPS7Q9Y2R9 242 aaKnown RBP10.57□□□□□ -0.72
TOP3A-205ENST00000477508 FBN1P35555 2871 aaKnown RBP10.57□□□□□ -0.72
TOP3A-205ENST00000477508 IGKV1-6A0A0C4DH72 117 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 A0A1W2PPI3 338 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 A6NDX4 124 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 SULT1C2O00338 296 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 BET1O15155 118 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 SLC31A2O15432 143 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 HLA-DQB1P01920 261 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 FOXL1Q12952 345 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 HABP2Q14520 560 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-205ENST00000477508 HERPUD1Q15011 391 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 LINC01559Q495D7 138 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 IGSF11Q5DX21 431 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 DHRS7BQ6IAN0 325 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-205ENST00000477508 FAM53AQ6NSI3 398 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-205ENST00000477508 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-205ENST00000477508 BEST4Q8NFU0 473 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 RTN4IP1Q8WWV3 396 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-205ENST00000477508 MAFIPQ8WZ33 124 aa10.56□□□□□ -0.72
TOP3A-205ENST00000477508 DGCR14Q96DF8 476 aaKnown RBP10.56□□□□□ -0.72
TOP3A-205ENST00000477508 AKR1E2Q96JD6 320 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms