RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TPRKBQ9Y3C4 175 aa9.09□□□□□ -0.95
VARS2-208ENST00000477052 LSM4Q9Y4Z0 139 aaKnown RBP9.09□□□□□ -0.95
VARS2-208ENST00000477052 ATP6V0E1O15342 81 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 DENRO43583 198 aaKnown RBP9.08□□□□□ -0.96
VARS2-208ENST00000477052 LANCL1O43813 399 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 LY86O95711 162 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 CELP19835 753 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 FUT3P21217 361 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 ZNF137PP52743 207 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 ACTBP60709 375 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 GNB1P62873 340 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 KIAA0141Q14154 515 aaPredicted RBP9.08□□□□□ -0.96
VARS2-208ENST00000477052 RBM48Q5RL73 367 aaKnown RBP9.08□□□□□ -0.96
VARS2-208ENST00000477052 C9orf66Q5T8R8 295 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 RNLSQ5VYX0 342 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 LYPD6Q86Y78 171 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 GAPTQ8N292 157 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 MRPL30Q8TCC3 161 aaKnown RBP9.08□□□□□ -0.96
VARS2-208ENST00000477052 NABP2Q9BQ15 211 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 SULT4A1Q9BR01 284 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 FAAP24Q9BTP7 215 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 ABHD14AQ9BUJ0 271 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 GON7Q9BXV9 100 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 PARP12Q9H0J9 701 aaKnown RBP9.08□□□□□ -0.96
VARS2-208ENST00000477052 DUSP21Q9H596 190 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 SPACA1Q9HBV2 294 aa9.08□□□□□ -0.96
VARS2-208ENST00000477052 IGHV7-81A0A0B4J1V7 117 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 PTGES3LE9PB15 166 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 MYL12BO14950 172 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 PDCD6O75340 191 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 SC5DO75845 299 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 IGF1P05019 195 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 CRHBPP24387 322 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 BLVRBP30043 206 aaPredicted RBP9.07□□□□□ -0.96
VARS2-208ENST00000477052 GP2P55259 537 aaKnown RBP9.07□□□□□ -0.96
VARS2-208ENST00000477052 WNT4P56705 351 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 OR8H1Q8NGG4 311 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 OR1N2Q8NGR9 330 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 KCNIP1Q9NZI2 227 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 BLOC1S6Q9UL45 172 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 ERGIC3Q9Y282 383 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 FBXO7Q9Y3I1 522 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 A3GALT2U3KPV4 340 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 U3KQK5 164 aa9.07□□□□□ -0.96
VARS2-208ENST00000477052 SAA2-SAA4A0A096LPE2 208 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 I3L521 148 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 TXNL1O43396 289 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 RAMP3O60896 148 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 SAA2P0DJI9 122 aaPredicted RBP9.06□□□□□ -0.96
VARS2-208ENST00000477052 PPIFP30405 207 aaKnown RBP9.06□□□□□ -0.96
VARS2-208ENST00000477052 TAS2R43P59537 309 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 NDPQ00604 133 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 FHL3Q13643 280 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 IRF3Q14653 427 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 ECSCRQ19T08 205 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 Q3ZCU0 254 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 RPL39P5Q59GN2 51 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 TMEM65Q6PI78 240 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 GLDNQ6ZMI3 551 aaPredicted RBP9.06□□□□□ -0.96
VARS2-208ENST00000477052 C6orf201Q7Z4U5 140 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 NANOGP1Q8N7R0 232 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 ZNF491Q8N8L2 437 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 SETD6Q8TBK2 473 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 IL1F10Q8WWZ1 152 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 MRPS24Q96EL2 167 aaKnown RBP9.06□□□□□ -0.96
VARS2-208ENST00000477052 ZNF251Q9BRH9 671 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 NICN1Q9BSH3 213 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 MND1Q9BWT6 205 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 OR51J1Q9H342 316 aa9.06□□□□□ -0.96
VARS2-208ENST00000477052 MBNL3Q9NUK0 354 aaKnown RBP9.06□□□□□ -0.96
VARS2-208ENST00000477052 TRAV41A0A0B4J266 112 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 FCN1O00602 326 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 NBR2O15453 112 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 RGS10O43665 173 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 SOX15O60248 233 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 CHATP28329 748 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 HTR2CP28335 458 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 SLURP1P55000 103 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 GABARAPL2P60520 117 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 C5orf64Q2M2E5 130 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 TRAT1Q6PIZ9 186 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 FAM131AQ6UXB0 335 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 ZNF833PQ6ZTB9 187 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 PRSS48Q7RTY5 328 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 OVCH2Q7RTZ1 564 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 MYOZ3Q8TDC0 251 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 DCUN1D4Q92564 292 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 CLCC1Q96S66 551 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 HDHD3Q9BSH5 251 aaPredicted RBP9.05□□□□□ -0.96
VARS2-208ENST00000477052 TMED9Q9BVK6 235 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 YTHDF1Q9BYJ9 559 aaKnown RBP9.05□□□□□ -0.96
VARS2-208ENST00000477052 IFI27L2Q9H2X8 130 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 FBXL15Q9H469 300 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 RAB9BQ9NP90 201 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 JPT1Q9UK76 154 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 GAB2Q9UQC2 676 aa9.05□□□□□ -0.96
VARS2-208ENST00000477052 ZNF256Q9Y2P7 627 aaPredicted RBP9.05□□□□□ -0.96
VARS2-208ENST00000477052 LSM2Q9Y333 95 aaKnown RBP9.05□□□□□ -0.96
VARS2-208ENST00000477052 A0A0A6YYD4 124 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms