RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 DIRAS3O95661 229 aa23.87■■□□□ 1.41
HOXB3-208ENST00000476342 DTX3Q8N9I9 347 aa23.87■■□□□ 1.41
HOXB3-208ENST00000476342 OR2AK2Q8NG84 335 aa23.87■■□□□ 1.41
HOXB3-208ENST00000476342 FAM216AQ8WUB2 273 aa23.87■■□□□ 1.41
HOXB3-208ENST00000476342 TMEM158Q8WZ71 300 aa23.87■■□□□ 1.41
HOXB3-208ENST00000476342 CHIAQ9BZP6 476 aa23.87■■□□□ 1.41
HOXB3-208ENST00000476342 NDUFA13Q9P0J0 144 aa23.87■■□□□ 1.41
HOXB3-208ENST00000476342 SLC31A2O15432 143 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 SSX5O60225 188 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 GSTT2P0CG29 244 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 GSTT2BP0CG30 244 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 ZNF134P52741 427 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 CT45A1Q5HYN5 189 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 C16orf87Q6PH81 154 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 CT45A3Q8NHU0 189 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 CABLES2Q9BTV7 478 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 ADAM30Q9UKF2 790 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 VPREB3Q9UKI3 123 aa23.86■■□□□ 1.41
HOXB3-208ENST00000476342 CBX5P45973 191 aa23.85■■□□□ 1.41
HOXB3-208ENST00000476342 RAB7AP51149 207 aa23.85■■□□□ 1.41
HOXB3-208ENST00000476342 DYNLT3P51808 116 aa23.85■■□□□ 1.41
HOXB3-208ENST00000476342 EDARADDQ8WWZ3 215 aa23.85■■□□□ 1.41
HOXB3-208ENST00000476342 OR1A1Q9P1Q5 309 aa23.85■■□□□ 1.41
HOXB3-208ENST00000476342 BRS3P32247 399 aa23.84■■□□□ 1.41
HOXB3-208ENST00000476342 CEACAM6P40199 344 aa23.84■■□□□ 1.41
HOXB3-208ENST00000476342 HERPUD1Q15011 391 aa23.84■■□□□ 1.41
HOXB3-208ENST00000476342 SLIRPQ9GZT3 109 aaKnown RBP23.84■■□□□ 1.41
HOXB3-208ENST00000476342 MRPS7Q9Y2R9 242 aaKnown RBP23.84■■□□□ 1.41
HOXB3-208ENST00000476342 IGKV1-6A0A0C4DH72 117 aa23.84■■□□□ 1.41
HOXB3-208ENST00000476342 HSD17B6O14756 317 aa23.84■■□□□ 1.41
HOXB3-208ENST00000476342 BET1O15155 118 aa23.84■■□□□ 1.41
HOXB3-208ENST00000476342 LPLP06858 475 aa23.84■■□□□ 1.41
HOXB3-208ENST00000476342 PTHLHP12272 177 aa23.84■■□□□ 1.41
HOXB3-208ENST00000476342 KRTAP24-1Q3LI83 254 aa23.84■■□□□ 1.41
HOXB3-208ENST00000476342 OR10J5Q8NHC4 309 aa23.84■■□□□ 1.41
HOXB3-208ENST00000476342 C6orf62Q9GZU0 229 aaPredicted RBP23.84■■□□□ 1.41
HOXB3-208ENST00000476342 ITGB1BP1O14713 200 aa23.83■■□□□ 1.4
HOXB3-208ENST00000476342 ZNF137PP52743 207 aa23.83■■□□□ 1.4
HOXB3-208ENST00000476342 IGSF11Q5DX21 431 aa23.83■■□□□ 1.4
HOXB3-208ENST00000476342 OR8H3Q8N146 312 aa23.83■■□□□ 1.4
HOXB3-208ENST00000476342 LYG1Q8N1E2 194 aa23.83■■□□□ 1.4
HOXB3-208ENST00000476342 EXTL2Q9UBQ6 330 aa23.83■■□□□ 1.4
HOXB3-208ENST00000476342 IGKV1D-8A0A087WSZ0 117 aa23.82■■□□□ 1.4
HOXB3-208ENST00000476342 GAPDHP04406 335 aaKnown RBP23.82■■□□□ 1.4
HOXB3-208ENST00000476342 PRSS3P35030 304 aa23.82■■□□□ 1.4
HOXB3-208ENST00000476342 ZNF816Q0VGE8 651 aaPredicted RBP23.82■■□□□ 1.4
HOXB3-208ENST00000476342 LAX1Q8IWV1 398 aa23.82■■□□□ 1.4
HOXB3-208ENST00000476342 GINS4Q9BRT9 223 aa23.82■■□□□ 1.4
HOXB3-208ENST00000476342 DCUN1D5Q9BTE7 237 aa23.82■■□□□ 1.4
HOXB3-208ENST00000476342 PITPNC1Q9UKF7 332 aa23.82■■□□□ 1.4
HOXB3-208ENST00000476342 TRBV6-7A0A0A0MS04 114 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 CTDSP2O14595 271 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 TXNL1O43396 289 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 HLA-DQB1P01920 261 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 CTXN2P0C2S0 81 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 RAB13P51153 203 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 RPL15P61313 204 aaKnown RBP23.81■■□□□ 1.4
HOXB3-208ENST00000476342 DIAPH2-AS1Q14236 149 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 LY6EQ16553 131 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 HOGA1Q86XE5 327 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 BEST4Q8NFU0 473 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 MCFD2Q8NI22 146 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 PIFOQ8TCI5 191 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 ST6GALNAC6Q969X2 333 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 TOLLIPQ9H0E2 274 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 IFT46Q9NQC8 304 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 RDH8Q9NYR8 311 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 ANXA10Q9UJ72 324 aa23.81■■□□□ 1.4
HOXB3-208ENST00000476342 RNF212BA8MTL3 300 aa23.8■■□□□ 1.4
HOXB3-208ENST00000476342 CNIH2Q6PI25 160 aa23.8■■□□□ 1.4
HOXB3-208ENST00000476342 LIAT1Q6ZQX7 453 aa23.8■■□□□ 1.4
HOXB3-208ENST00000476342 GVQW1Q8N7I0 195 aa23.8■■□□□ 1.4
HOXB3-208ENST00000476342 DGCR14Q96DF8 476 aaKnown RBP23.8■■□□□ 1.4
HOXB3-208ENST00000476342 MIXL1Q9H2W2 232 aa23.8■■□□□ 1.4
HOXB3-208ENST00000476342 GHITMQ9H3K2 345 aa23.8■■□□□ 1.4
HOXB3-208ENST00000476342 TCF19Q9Y242 345 aa23.8■■□□□ 1.4
HOXB3-208ENST00000476342 A0A1W2PPI3 338 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 DPPA5A6NC42 116 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 GPR137BO60478 399 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 TPPPO94811 219 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 CRYBA1P05813 215 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 ACTG1P63261 375 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 SNX29P2Q8IUI4 249 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP23.79■■□□□ 1.4
HOXB3-208ENST00000476342 C15orf40Q8WUR7 153 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 RTN4IP1Q8WWV3 396 aaPredicted RBP23.79■■□□□ 1.4
HOXB3-208ENST00000476342 GCDHQ92947 438 aaPredicted RBP23.79■■□□□ 1.4
HOXB3-208ENST00000476342 IFI27L2Q9H2X8 130 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 RAB18Q9NP72 206 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 PIPOXQ9P0Z9 390 aa23.79■■□□□ 1.4
HOXB3-208ENST00000476342 FBN1P35555 2871 aaKnown RBP23.79■■□□□ 1.4
HOXB3-208ENST00000476342 FAM181BA6NEQ2 426 aa23.78■■□□□ 1.4
HOXB3-208ENST00000476342 ST8SIA5O15466 376 aa23.78■■□□□ 1.4
HOXB3-208ENST00000476342 ARPC4P59998 168 aa23.78■■□□□ 1.4
HOXB3-208ENST00000476342 TGIF2LXQ8IUE1 241 aa23.78■■□□□ 1.4
HOXB3-208ENST00000476342 NXF2Q9GZY0 626 aaKnown RBP23.78■■□□□ 1.4
HOXB3-208ENST00000476342 PARP12Q9H0J9 701 aaKnown RBP23.78■■□□□ 1.4
HOXB3-208ENST00000476342 C11orf54Q9H0W9 315 aaPredicted RBP23.78■■□□□ 1.4
HOXB3-208ENST00000476342 SCPEP1Q9HB40 452 aa23.78■■□□□ 1.4
HOXB3-208ENST00000476342 IGHV1-3A0A0C4DH29 117 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms