RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 DGCR14Q96DF8 476 aaKnown RBP3.15□□□□□ -1.91
SMC5-203ENST00000475540 PPP1R36Q96LQ0 422 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 MARVELD1Q9BSK0 173 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 OR51I2Q9H344 312 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 HES4Q9HCC6 221 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 PRELID1Q9Y255 219 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 HDGFL3Q9Y3E1 203 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 ZFYVE9O95405 1425 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 TSPOAP1O95153 1857 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 C5orf49A4QMS7 147 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 F5H5P2 479 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 ISLRO14498 428 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 POP7O75817 140 aaKnown RBP3.14□□□□□ -1.91
SMC5-203ENST00000475540 SERPINA1P01009 418 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 IL4P05112 153 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 OR12D1P0DN82 309 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 CNTFRP26992 372 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 SPCS3P61009 180 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 RAB5BP61020 215 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 EMX1Q04741 257 aaPredicted RBP3.14□□□□□ -1.91
SMC5-203ENST00000475540 ZNF816Q0VGE8 651 aaPredicted RBP3.14□□□□□ -1.91
SMC5-203ENST00000475540 TRMT12Q53H54 448 aaKnown RBP3.14□□□□□ -1.91
SMC5-203ENST00000475540 ELP2Q6IA86 826 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 LCN8Q6JVE9 175 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 DPPA2Q7Z7J5 298 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 MARCH3Q86UD3 253 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 LRRC25Q8N386 305 aaPredicted RBP3.14□□□□□ -1.91
SMC5-203ENST00000475540 ZNRF2Q8NHG8 242 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 C2orf15Q8WU43 125 aaKnown RBP3.14□□□□□ -1.91
SMC5-203ENST00000475540 GPR82Q96P67 336 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 PECRQ9BY49 303 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 ZSCAN16Q9H4T2 348 aaPredicted RBP3.14□□□□□ -1.91
SMC5-203ENST00000475540 GLTPQ9NZD2 209 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 LINC00527Q9UJ94 153 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 ARAP3Q8WWN8 1544 aa3.14□□□□□ -1.91
SMC5-203ENST00000475540 NPATQ14207 1427 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 YEATS2Q9ULM3 1422 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 IGHV1-45A0A0A0MS14 117 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 ZNF850A8MQ14 1090 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 DENRO43583 198 aaKnown RBP3.13□□□□□ -1.91
SMC5-203ENST00000475540 OR7C2O60412 319 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 CCNKO75909 580 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 CCNE2O96020 404 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 PSMB3P49720 205 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 FABP5Q01469 135 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 SNCBQ16143 134 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 KLHL12Q53G59 568 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 MRPL2Q5T653 305 aaKnown RBP3.13□□□□□ -1.91
SMC5-203ENST00000475540 HIST2H3PS2Q5TEC6 136 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 Q6ZRU5 148 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 OR9I1Q8NGQ6 314 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 APOBEC3DQ96AK3 386 aaPredicted RBP3.13□□□□□ -1.91
SMC5-203ENST00000475540 SLC35G5Q96KT7 338 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 RNF5Q99942 180 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 TMEM38BQ9NVV0 291 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 IL37Q9NZH6 218 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 ARL5AQ9Y689 179 aa3.13□□□□□ -1.91
SMC5-203ENST00000475540 TNS2Q63HR2 1409 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 TGIF2-C20orf24A0A0A6YYL0 155 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 SMIM9A6NGZ8 99 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 EVPLLA8MZ36 301 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 B4DEV8 164 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 H3BSA7 217 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 ZNF708P17019 499 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 MAGEA12P43365 314 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 GABARAPL2P60520 117 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 RPS24P62847 133 aaKnown RBP3.12□□□□□ -1.91
SMC5-203ENST00000475540 ELF3P78545 371 aaPredicted RBP3.12□□□□□ -1.91
SMC5-203ENST00000475540 HLA-DRB3P79483 266 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 EDDM3AQ14507 147 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 MAPK14Q16539 360 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 MESTQ5EB52 335 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 ZNF678Q5SXM1 525 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 FAM104BQ5XKR9 115 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 SFXN4Q6P4A7 337 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 TCF23Q7RTU1 214 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 OR2K2Q8NGT1 345 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 SPPL2BQ8TCT7 592 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 ACY3Q96HD9 319 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 REEP6Q96HR9 211 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 CEP19Q96LK0 163 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 GTSF1LQ9H1H1 148 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 FKBP14Q9NWM8 211 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 RWDD2AQ9UIY3 292 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 MMACHCQ9Y4U1 282 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 SLC22A7Q9Y694 548 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 ZBED9Q6R2W3 1325 aa3.12□□□□□ -1.91
SMC5-203ENST00000475540 NCOA1Q15788 1441 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 TRAV8-1A0A0A6YYK1 113 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 CDRT1O95170 752 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 FBP1P09467 338 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 OR5G3P0C626 314 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 OR13C7P0DN81 318 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 TMEM267Q0VDI3 215 aaPredicted RBP3.11□□□□□ -1.91
SMC5-203ENST00000475540 SP6Q3SY56 376 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 FAM78BQ5VT40 261 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 ATP5L2Q7Z4Y8 100 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 DOLPP1Q86YN1 238 aa3.11□□□□□ -1.91
SMC5-203ENST00000475540 PXT1Q8NFP0 134 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms