RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 JPT1Q9UK76 154 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 AP4S1Q9Y587 144 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 ORC6Q9Y5N6 252 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 GMPPBQ9Y5P6 360 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 SOX15O60248 233 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 RGS11O94810 467 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 FADS2O95864 444 aaKnown RBP9.67□□□□□ -0.86
SKA3-206ENST00000475251 CNTFRP26992 372 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 BDKRB2P30411 391 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 SOX2P48431 317 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 PLGLAQ15195 96 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 MORN2Q502X0 79 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 ACTBL2Q562R1 376 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 C19orf54Q5BKX5 351 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 CD200R1LQ6Q8B3 271 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 AMIGO2Q86SJ2 522 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 OR4K15Q8NH41 348 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 OR1L1Q8NH94 360 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 TMEM106AQ96A25 262 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 MRPS24Q96EL2 167 aaKnown RBP9.67□□□□□ -0.86
SKA3-206ENST00000475251 NABP2Q9BQ15 211 aa9.67□□□□□ -0.86
SKA3-206ENST00000475251 MRPL20Q9BYC9 149 aaKnown RBP9.67□□□□□ -0.86
SKA3-206ENST00000475251 ISG20L2Q9H9L3 353 aaKnown RBP9.67□□□□□ -0.86
SKA3-206ENST00000475251 RANGRFQ9HD47 186 aaPredicted RBP9.67□□□□□ -0.86
SKA3-206ENST00000475251 RCC2Q9P258 522 aaKnown RBP9.67□□□□□ -0.86
SKA3-206ENST00000475251 IGHV3-11P01762 117 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 TPPP2P59282 170 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 CX3CL1P78423 397 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 LRRC36Q1X8D7 754 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 MOGAT2Q3SYC2 334 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 SLC22A6Q4U2R8 563 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 AKIRIN2Q53H80 203 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 RAB12Q6IQ22 244 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 FAM71F2Q6NXP2 309 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 ZNF833PQ6ZTB9 187 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 GAPTQ8N292 157 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 LGALS12Q96DT0 336 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 RBMXL1Q96E39 390 aaKnown RBP9.66□□□□□ -0.86
SKA3-206ENST00000475251 RITA1Q96K30 269 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 TAF9BQ9HBM6 251 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 OAZ3Q9UMX2 235 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 NUBP2Q9Y5Y2 271 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 A3GALT2U3KPV4 340 aa9.66□□□□□ -0.86
SKA3-206ENST00000475251 RRHO14718 337 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 YPEL1O60688 119 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 TFAP2AP05549 437 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 GLAP06280 429 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 NDPQ00604 133 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 RIPK1Q13546 671 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 CCDC58Q4VC31 144 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 LY6G6FQ5SQ64 297 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 LCN12Q6JVE5 192 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 UNQ5815/PRO19632Q6UWF5 114 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 HAPLN4Q86UW8 402 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 PPP1R27Q86WC6 154 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 ODF3L1Q8IXM7 274 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 OR2AK2Q8NG84 335 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 CASTOR1Q8WTX7 329 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 CENPNQ96H22 339 aaPredicted RBP9.65□□□□□ -0.86
SKA3-206ENST00000475251 RHOVQ96L33 236 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 Q96MT0 163 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 YPEL2Q96QA6 119 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 TMED9Q9BVK6 235 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 MBNL3Q9NUK0 354 aaKnown RBP9.65□□□□□ -0.86
SKA3-206ENST00000475251 ERVK13-1Q9NX77 482 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 CNOT2Q9NZN8 540 aaKnown RBP9.65□□□□□ -0.86
SKA3-206ENST00000475251 PIPOXQ9P0Z9 390 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 CKLFQ9UBR5 152 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 FBXO7Q9Y3I1 522 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 LRRC42Q9Y546 428 aa9.65□□□□□ -0.86
SKA3-206ENST00000475251 SAA2-SAA4A0A096LPE2 208 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 A0A0G2JLM5 398 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 OR5H14A6NHG9 310 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 FAM90A7PA6NKC0 464 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 FAM90A23PA8MXZ1 464 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 E9PI62 339 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 SLC25A17O43808 307 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 SC5DO75845 299 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 RBBP9O75884 186 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 TRGV3P03979 118 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 SAA2P0DJI9 122 aaPredicted RBP9.64□□□□□ -0.87
SKA3-206ENST00000475251 RCC1P18754 421 aaPredicted RBP9.64□□□□□ -0.87
SKA3-206ENST00000475251 MC5RP33032 325 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 ADARB1P78563 741 aaKnown RBP9.64□□□□□ -0.87
SKA3-206ENST00000475251 HTD2P86397 168 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 RPL22L1Q6P5R6 122 aaKnown RBP9.64□□□□□ -0.87
SKA3-206ENST00000475251 GALMQ96C23 342 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 MS4A10Q96PG2 267 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 ZNF184Q99676 751 aaPredicted RBP9.64□□□□□ -0.87
SKA3-206ENST00000475251 RNF5Q99942 180 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 FBXL15Q9H469 300 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 PEX16Q9Y5Y5 336 aa9.64□□□□□ -0.87
SKA3-206ENST00000475251 C13orf42A0A1B0GVH6 325 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 A0A1W2PP11 408 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 H3BUA1 57 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 MAS1P04201 325 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 GSTP1P09211 210 aaKnown RBP9.63□□□□□ -0.87
SKA3-206ENST00000475251 PPP1CCP36873 323 aaKnown RBP9.63□□□□□ -0.87
SKA3-206ENST00000475251 GNMTQ14749 295 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 TATDN3Q17R31 274 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms