RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 CD300LFQ8TDQ1 290 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 MRGPRDQ8TDS7 321 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 C14orf79Q96F83 325 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 HSD17B10Q99714 261 aaKnown RBP18.19■□□□□ 0.5
CCM2-206ENST00000474617 PTPRQQ9UMZ3 2332 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 ASPMQ8IZT6 3477 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 TRAV39A0A0B4J263 110 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 C3orf80F5H4A9 247 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 C15orf65H3BRN8 121 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 THBDP07204 575 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 BLOC1S1P78537 153 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 TEX36Q5VZQ5 186 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 GALNT11Q8NCW6 608 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 OR2S2Q9NQN1 319 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 LPAR3Q9UBY5 353 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 PPP1R3CQ9UQK1 317 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 F2RL2O00254 374 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 YPEL1O60688 119 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 SEC11BP0C7V7 166 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 RAB5CP51148 216 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 BSPH1Q075Z2 132 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 FAM74A1Q5RGS3 127 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 STUMQ69YW2 141 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 RPL7L1Q6DKI1 246 aaKnown RBP18.18■□□□□ 0.5
CCM2-206ENST00000474617 C1orf87Q8N0U7 546 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 STPG2Q8N412 459 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 OR13A1Q8NGR1 328 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 YPEL2Q96QA6 119 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 NUP50Q9UKX7 468 aa18.18■□□□□ 0.5
CCM2-206ENST00000474617 PRR14LQ5THK1 2151 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 C17orf100A8MU93 164 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 OR4A8P0C604 315 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 SULT1A2P50226 295 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 TAS2R30P59541 319 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 EIF4EBP1Q13541 118 aaPredicted RBP18.17■□□□□ 0.5
CCM2-206ENST00000474617 ADIPOQQ15848 244 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 PRR30Q53SZ7 412 aaPredicted RBP18.17■□□□□ 0.5
CCM2-206ENST00000474617 IL34Q6ZMJ4 242 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 C22orf34Q6ZV56 151 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 TMED6Q8WW62 240 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 MARC2Q969Z3 335 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 OR2D2Q9H210 308 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 TAS2R3Q9NYW6 316 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 METRNQ9UJH8 293 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 GAB2Q9UQC2 676 aa18.17■□□□□ 0.5
CCM2-206ENST00000474617 ZGRF1Q86YA3 2104 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 RP1L1Q8IWN7 2480 aaPredicted RBP18.16■□□□□ 0.5
CCM2-206ENST00000474617 CHRNB4P30926 498 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 ARHGDIBP52566 201 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 AKR1C2P52895 323 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 RPL23AP62750 156 aaKnown RBP18.16■□□□□ 0.5
CCM2-206ENST00000474617 SMIM8Q96KF7 97 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 GINS3Q9BRX5 216 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 ZNF665Q9H7R5 613 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 CACFD1Q9UGQ2 172 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 SH3BGRL2Q9UJC5 107 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 MMP24Q9Y5R2 645 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 WSB1Q9Y6I7 421 aa18.16■□□□□ 0.5
CCM2-206ENST00000474617 MAP1BP46821 2468 aaKnown RBP18.15■□□□□ 0.5
CCM2-206ENST00000474617 TRGV8A0A0C4DH27 118 aa18.15■□□□□ 0.5
CCM2-206ENST00000474617 LY86O95711 162 aa18.15■□□□□ 0.5
CCM2-206ENST00000474617 FAM157CP0CG43 387 aa18.15■□□□□ 0.5
CCM2-206ENST00000474617 RAB7AP51149 207 aa18.15■□□□□ 0.5
CCM2-206ENST00000474617 EWSR1Q01844 656 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCM2-206ENST00000474617 OR52L2PQ8NGH6 319 aa18.15■□□□□ 0.5
CCM2-206ENST00000474617 GPR146Q96CH1 333 aa18.15■□□□□ 0.5
CCM2-206ENST00000474617 SPTBN2O15020 2390 aa18.15■□□□□ 0.5
CCM2-206ENST00000474617 MGAQ8IWI9 3026 aa18.15■□□□□ 0.5
CCM2-206ENST00000474617 POLR2GP62487 172 aaKnown RBP eCLIP18.14■□□□□ 0.49
CCM2-206ENST00000474617 NCMAPQ5T1S8 102 aa18.14■□□□□ 0.49
CCM2-206ENST00000474617 MMP26Q9NRE1 261 aa18.14■□□□□ 0.49
CCM2-206ENST00000474617 NDRG3Q9UGV2 375 aa18.14■□□□□ 0.49
CCM2-206ENST00000474617 RNF115Q9Y4L5 304 aa18.14■□□□□ 0.49
CCM2-206ENST00000474617 NKX6-3A6NJ46 265 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 SSSCA1O60232 199 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 MED6O75586 246 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 SSTR5P35346 364 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 CAV2P51636 162 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 EDDM3AQ14507 147 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 ZNF585BQ52M93 769 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 BOLLQ8N9W6 283 aaKnown RBP18.13■□□□□ 0.49
CCM2-206ENST00000474617 RNASE6Q93091 150 aaKnown RBP18.13■□□□□ 0.49
CCM2-206ENST00000474617 LINC00574Q9H8X3 128 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 PARP11Q9NR21 331 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 TRGV10A0A0A0MS01 117 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 TRAV38-1A0A0B4J264 116 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 ZNF705EA8MWA4 302 aaPredicted RBP18.13■□□□□ 0.49
CCM2-206ENST00000474617 TOR1AO14656 332 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 SCAF4O95104 1147 aaKnown RBP18.13■□□□□ 0.49
CCM2-206ENST00000474617 EFNB3Q15768 340 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 CXorf66Q5JRM2 361 aaPredicted RBP18.13■□□□□ 0.49
CCM2-206ENST00000474617 ZNF788Q6ZQV5 615 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 STX12Q86Y82 276 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 TMEM252Q8N6L7 170 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.13■□□□□ 0.49
CCM2-206ENST00000474617 CORO2AQ92828 525 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 MS4A5Q9H3V2 200 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 COQ3Q9NZJ6 369 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 GNG12Q9UBI6 72 aa18.13■□□□□ 0.49
CCM2-206ENST00000474617 STRAPQ9Y3F4 350 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms