RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 DSCAML1Q8TD84 2053 aa8.47□□□□□ -1.05
PRPF38A-202ENST00000474048 IGHV4-61A0A0C4DH41 118 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 IGHV2-70DA0A0C4DH43 119 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 VWC2LB2RUY7 222 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 TUSC2O75896 110 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 OR4E1P0C645 316 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 IGHV1-8P0DP01 117 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 ZNF16P17020 682 aaPredicted RBP8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 SRPXP78539 464 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 Q3ZCU0 254 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 MORN2Q502X0 79 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 AADACL3Q5VUY0 350 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 Q6ZNX1 250 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 UXS1Q8NBZ7 420 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 COQ8AQ8NI60 647 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 ZNF596Q8TC21 504 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 CASTOR1Q8WTX7 329 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 Q96MF0 132 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 PHB2Q99623 299 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 RSRP1Q9BUV0 290 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 MED28Q9H204 178 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 TMEM133Q9H2Q1 129 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 METTL8Q9H825 291 aaKnown RBP8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 SLC2A9Q9NRM0 540 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 PIPOXQ9P0Z9 390 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 GPR132Q9UNW8 380 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 VSIG4Q9Y279 399 aa8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 USP9YO00507 2555 aaPredicted RBP8.46□□□□□ -1.06
PRPF38A-202ENST00000474048 COL12A1Q99715 3063 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 C17orf98A8MV24 154 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 B4DSR2 109 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 C22orf46C9J442 243 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 ITGB1BP1O14713 200 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 RAB29O14966 203 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 ST8SIA5O15466 376 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 PFDN1O60925 122 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 B3GALNT1O75752 331 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 IFNA2P01563 188 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 IGHV3-7P01780 117 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 IL5P05113 134 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 PI3P19957 117 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 CD34P28906 385 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 DVL1P1P54792 670 aaPredicted RBP8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 LGALS4P56470 323 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 LMO4P61968 165 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 ARF6P62330 175 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 DCAF12L2Q5VW00 463 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 NCR3LG1Q68D85 454 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 ZNF660Q6AZW8 331 aaPredicted RBP8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 LIN54Q6MZP7 749 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 GLDNQ6ZMI3 551 aaPredicted RBP8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 TCF23Q7RTU1 214 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 C5orf24Q7Z6I8 188 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 LYG2Q86SG7 212 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 SLC25A42Q86VD7 318 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 LYG1Q8N1E2 194 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 ABHD12Q8N2K0 398 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 OR9G1Q8NH87 305 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 RNASE11Q8TAA1 199 aaKnown RBP8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 RTN4IP1Q8WWV3 396 aaPredicted RBP8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 TNFRSF14Q92956 283 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 LEAP2Q969E1 77 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 ZDHHC16Q969W1 377 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 CLEC7AQ9BXN2 247 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 ALX4Q9H161 411 aaPredicted RBP8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 LINC00574Q9H8X3 128 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 CCL28Q9NRJ3 127 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 RNF150Q9ULK6 438 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 PRELID3BQ9Y3B1 194 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 KPTNQ9Y664 436 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 ALG5Q9Y673 324 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 AKAP6Q13023 2319 aa8.45□□□□□ -1.06
PRPF38A-202ENST00000474048 ARID1AO14497 2285 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 TRAV20A0A0B4J274 112 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 IGKV1D-13A0A0B4J2D9 117 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 SNRPGP15A8MWD9 76 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 TNFSF12O43508 249 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 ATG12O94817 140 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 TOX4O94842 621 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 SERPINE2P07093 398 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 MSMBP08118 114 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 CGB3P0DN86 165 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 CGB7P0DN87 165 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 IGKV1-13P0DP09 117 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 GATA3P23771 443 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 COX7A1P24310 79 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 CEACAM3P40198 252 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 ARHGDIBP52566 201 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 SLC9A3R2Q15599 337 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 MSMO1Q15800 293 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 LY6G6FQ5SQ64 297 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 ZNF818PQ6ZRF7 136 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 C1orf122Q6ZSJ8 110 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 TBC1D26Q86UD7 250 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 LINC01356Q8N9X3 169 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 LY6G5BQ8NDX9 201 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 OR51H1Q8NH63 302 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 ZNF431Q8TF32 576 aaPredicted RBP8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 TCTEX1D2Q8WW35 142 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms