RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 RAB24Q969Q5 203 aa5.61□□□□□ -1.51
CKS1B-205ENST00000473344 RAB3CQ96E17 227 aa5.61□□□□□ -1.51
CKS1B-205ENST00000473344 PGAM5Q96HS1 289 aa5.61□□□□□ -1.51
CKS1B-205ENST00000473344 IL4I1Q96RQ9 567 aa5.61□□□□□ -1.51
CKS1B-205ENST00000473344 CITED2Q99967 270 aaPredicted RBP5.61□□□□□ -1.51
CKS1B-205ENST00000473344 NIPSNAP1Q9BPW8 284 aa5.61□□□□□ -1.51
CKS1B-205ENST00000473344 TINAGL1Q9GZM7 467 aaPredicted RBP5.61□□□□□ -1.51
CKS1B-205ENST00000473344 TOLLIPQ9H0E2 274 aa5.61□□□□□ -1.51
CKS1B-205ENST00000473344 TLNRD1Q9H1K6 362 aa5.61□□□□□ -1.51
CKS1B-205ENST00000473344 RGCCQ9H4X1 137 aa5.61□□□□□ -1.51
CKS1B-205ENST00000473344 ELL3Q9HB65 397 aaPredicted RBP5.61□□□□□ -1.51
CKS1B-205ENST00000473344 PITPNC1Q9UKF7 332 aa5.61□□□□□ -1.51
CKS1B-205ENST00000473344 DNAH3Q8TD57 4116 aa5.61□□□□□ -1.51
CKS1B-205ENST00000473344 FXYD6-FXYD2A0A087WZ82 144 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 ACOD1A6NK06 481 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 E9PI62 339 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 AP4M1O00189 453 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 ARPC5O15511 151 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 BCL2L11O43521 198 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 CHST1O43916 411 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 GATBO75879 557 aaKnown RBP5.6□□□□□ -1.51
CKS1B-205ENST00000473344 CST4P01036 141 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 PF4P02776 101 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 CD1AP06126 327 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 SPP1P10451 314 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 SLC25A4P12235 298 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 IGLL1P15814 213 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 CXCL2P19875 107 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 COX7A1P24310 79 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 BTCP35070 178 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 ATP6V1E1P36543 226 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 PTGFRP43088 359 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 GLP1RP43220 463 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 PKIAP61925 76 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 RPL31P62899 125 aaKnown RBP5.6□□□□□ -1.51
CKS1B-205ENST00000473344 KLF9Q13886 244 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-205ENST00000473344 CRMP1Q14194 572 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 RBMS2Q15434 407 aaKnown RBP5.6□□□□□ -1.51
CKS1B-205ENST00000473344 OR2B11Q5JQS5 317 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 ZNF660Q6AZW8 331 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-205ENST00000473344 AWAT2Q6E213 333 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 SFXN4Q6P4A7 337 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 CRIP3Q6Q6R5 217 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 MRPL52Q86TS9 123 aaKnown RBP5.6□□□□□ -1.51
CKS1B-205ENST00000473344 SERPINA12Q8IW75 414 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 ZDHHC23Q8IYP9 409 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 KCNRGQ8N5I3 272 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 TCEANCQ8N8B7 351 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 DNAAF1Q8NEP3 725 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 OR6N2Q8NGY6 317 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 ZNF671Q8TAW3 534 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 TRMT10AQ8TBZ6 339 aaKnown RBP5.6□□□□□ -1.51
CKS1B-205ENST00000473344 RNF141Q8WVD5 230 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 FCAMRQ8WWV6 532 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 OR5P3Q8WZ94 311 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 THRSPQ92748 146 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 MALSU1Q96EH3 234 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 SAT2Q96F10 170 aaPredicted RBP5.6□□□□□ -1.51
CKS1B-205ENST00000473344 C2orf88Q9BSF0 95 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 PRSS22Q9GZN4 317 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 FXYD6Q9H0Q3 95 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 METTL9Q9H1A3 318 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 SERTAD4Q9NUC0 356 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 TVP23BQ9NYZ1 205 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 CLEC2DQ9UHP7 191 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 LRP12Q9Y561 859 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 COL7A1Q02388 2944 aa5.6□□□□□ -1.51
CKS1B-205ENST00000473344 WNK1Q9H4A3 2382 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 IGKV1D-17A0A075B6S4 117 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 A0A1W2PRX2 142 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 RIIAD1A6NNX1 92 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 ZNF732B4DXR9 585 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 NDUFB6O95139 128 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 CLUP10909 449 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 PSG2P11465 335 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 TPT1P13693 172 aaKnown RBP5.59□□□□□ -1.51
CKS1B-205ENST00000473344 GDNFP39905 211 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 VDAC2P45880 294 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-205ENST00000473344 GPM6AP51674 278 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 SLC25A1P53007 311 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 ERVFRD-1P60508 538 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 SNRPEP62304 92 aaKnown RBP5.59□□□□□ -1.51
CKS1B-205ENST00000473344 GNG3P63215 75 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 ACTC1P68032 377 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 ACTA1P68133 377 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 CD69Q07108 199 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 COTL1Q14019 142 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 CNN3Q15417 329 aaKnown RBP5.59□□□□□ -1.51
CKS1B-205ENST00000473344 RAB12Q6IQ22 244 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 HCP5Q6MZN7 132 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 ACOT7LQ6ZUV0 252 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 PRSS45Q7RTY3 260 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 COMMD2Q86X83 199 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 TMEM219Q86XT9 240 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 INO80EQ8NBZ0 244 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-205ENST00000473344 OR2T33Q8NG76 320 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 OR9Q2Q8NGE9 314 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 TERB2Q8NHR7 220 aa5.59□□□□□ -1.51
CKS1B-205ENST00000473344 PIFOQ8TCI5 191 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms