RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 SAA2P0DJI9 122 aaPredicted RBP13.05□□□□□ -0.32
USP40-212ENST00000473191 MAP2K4P45985 399 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 PLA2G7Q13093 441 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 P2RY14Q15391 338 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 PNLIPRP3Q17RR3 467 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 GLT8D1Q68CQ7 371 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 TEX38Q6PEX7 206 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 TRAT1Q6PIZ9 186 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 SVOPQ8N4V2 548 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 OR51D1Q8NGF3 324 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 NEDD4LQ96PU5 975 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 TMEM59Q9BXS4 323 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 IFI27L2Q9H2X8 130 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 KCNIP1Q9NZI2 227 aa13.05□□□□□ -0.32
USP40-212ENST00000473191 AK6Q9Y3D8 172 aaKnown RBP13.05□□□□□ -0.32
USP40-212ENST00000473191 G3V318 75 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 TXNL1O43396 289 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 YPEL1O60688 119 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 HSMCR30P0CW71 290 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 SOX6P35712 828 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 MYCNOSP40205 109 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 CLDN12P56749 244 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 ACTBP60709 375 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 HTD2P86397 168 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 MMDQ15546 238 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 TMEM30BQ3MIR4 351 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 STEAP3Q658P3 488 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 C11orf87Q6NUJ2 197 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 ZNF880Q6PDB4 577 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 ZNF833PQ6ZTB9 187 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 IL1F10Q8WWZ1 152 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 PHYHIPQ92561 330 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 THRSPQ92748 146 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 YPEL2Q96QA6 119 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 ZNF251Q9BRH9 671 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 LPAR5Q9H1C0 372 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 KLK15Q9H2R5 256 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 VCXQ9H320 206 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 DUSP21Q9H596 190 aa13.04□□□□□ -0.32
USP40-212ENST00000473191 ZNF107Q9UII5 783 aaPredicted RBP13.04□□□□□ -0.32
USP40-212ENST00000473191 CCL24O00175 119 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 DUS4LO95620 317 aaKnown RBP13.03□□□□□ -0.32
USP40-212ENST00000473191 NAPSAO96009 420 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 UBBP0CG47 229 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 BLVRBP30043 206 aaPredicted RBP13.03□□□□□ -0.32
USP40-212ENST00000473191 RAB25P57735 213 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 RPL39P5Q59GN2 51 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 DEFB121Q5J5C9 76 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 GLDNQ6ZMI3 551 aaPredicted RBP13.03□□□□□ -0.32
USP40-212ENST00000473191 COMMD1Q8N668 190 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 SETD6Q8TBK2 473 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 UFD1Q92890 307 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 GALMQ96C23 342 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 KCTD7Q96MP8 289 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 SCN3BQ9NY72 215 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 OR1A1Q9P1Q5 309 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 AK3Q9UIJ7 227 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 WSB1Q9Y6I7 421 aa13.03□□□□□ -0.32
USP40-212ENST00000473191 FOXI3A8MTJ6 420 aaPredicted RBP13.02□□□□□ -0.33
USP40-212ENST00000473191 LUMP51884 338 aaPredicted RBP13.02□□□□□ -0.33
USP40-212ENST00000473191 TMEM50BP56557 158 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 LINC00205P59089 165 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 FABP5Q01469 135 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 FOXE3Q13461 319 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 TPBGQ13641 420 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 KIAA0141Q14154 515 aaPredicted RBP13.02□□□□□ -0.33
USP40-212ENST00000473191 ZNF554Q86TJ5 538 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 RNF152Q8N8N0 203 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 OR8H1Q8NGG4 311 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 KCNG3Q8TAE7 436 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 ABHD14BQ96IU4 210 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 ANKRD60Q9BZ19 345 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 RAB9BQ9NP90 201 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 RRP15Q9Y3B9 282 aaKnown RBP13.02□□□□□ -0.33
USP40-212ENST00000473191 FBXO7Q9Y3I1 522 aa13.02□□□□□ -0.33
USP40-212ENST00000473191 IGHV7-81A0A0B4J1V7 117 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 ATP6V0E1O15342 81 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 BPNT1O95861 308 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 IGHG4P01861 327 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 IGF1P05019 195 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 VDAC1P21796 283 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 CRHBPP24387 322 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 PSMB8P28062 276 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 PPIFP30405 207 aaKnown RBP13.01□□□□□ -0.33
USP40-212ENST00000473191 NDPQ00604 133 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 CXorf66Q5JRM2 361 aaPredicted RBP13.01□□□□□ -0.33
USP40-212ENST00000473191 OR6M1Q8NGM8 313 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 CCDC90BQ9GZT6 254 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 GNB4Q9HAV0 340 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 CHMP1AQ9HD42 196 aaPredicted RBP13.01□□□□□ -0.33
USP40-212ENST00000473191 PLEKHJ1Q9NW61 149 aa13.01□□□□□ -0.33
USP40-212ENST00000473191 SHISA3A0PJX4 238 aa13□□□□□ -0.33
USP40-212ENST00000473191 RGS10O43665 173 aa13□□□□□ -0.33
USP40-212ENST00000473191 PROP1O75360 226 aa13□□□□□ -0.33
USP40-212ENST00000473191 ELANEP08246 267 aa13□□□□□ -0.33
USP40-212ENST00000473191 SCTP09683 121 aa13□□□□□ -0.33
USP40-212ENST00000473191 CT45A6P0DMU7 189 aa13□□□□□ -0.33
USP40-212ENST00000473191 CT45A5P0DMU8 189 aa13□□□□□ -0.33
USP40-212ENST00000473191 CT45A7P0DMV0 189 aa13□□□□□ -0.33
USP40-212ENST00000473191 CPEP16870 476 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms